Phyra76615 (Phytophthora ramorum)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 Phyra76615 T331990_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Phyra76615 Sox 259 293

Links

Other Sox family TFs
Other Phytophthora ramorum TFs

164 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
fgenesh_scip_prom.28083.3150 Phytophthora lateralis fgenesh_scip_prom.28083.3150 N 0.701
F443_09320 Phytophthora parasitica F443_09320 N 0.689
Physo127875 Phytophthora sojae Physo127875 N 0.674
fgenesh1_pm.C_scaffold_23000166 Phytophthora capsici fgenesh1_pm.C_scaffold_23000166 N 0.674
JL09_g5343 Pichia kudriavzevii JL09_g5343 N 0.581
Minc18937 Meloidogyne incognita Minc18937 N 0.574
ANCDUO_13942 Ancylostoma duodenale ANCDUO_13942 N 0.565
OESDEN_19415 Oesophagostomum dentatum OESDEN_19415 N 0.565
Myotis_brandtii_Hmgb2_10029741 Myotis brandtii Myotis_brandtii_Hmgb2_10029741 N 0.563
ENSFALG00000011068 Ficedula albicollis ENSFALG00000011068 N 0.561
ENSPSIG00000016857 Pelodiscus sinensis ENSPSIG00000016857 N 0.561
Aan_R006397 Calypte anna Aan_R006397 N 0.561
Gfo_R008143 Geospiza fortis Gfo_R008143 N 0.561
67303 Aureococcus anophagefferens 67303 N 0.561
DDB_G0287073 Dictyostelium discoideum DDB_G0287073 N 0.557
estExt_fgeneshDP_kg.C_1020010 Dictyostelium purpureum estExt_fgeneshDP_kg.C_1020010 N 0.557
HmN_000301900 Hymenolepis microstoma HmN_000301900 N 0.550
Myotis_brandtii_TIMM8A_10019481 Myotis brandtii Myotis_brandtii_TIMM8A_10019481 N 0.542
MPER_06248 Moniliophthora perniciosa MPER_06248 N 0.536
Gorai.005G106800 Gossypium raimondii Gorai.005G106800 N 0.536
WUBG_12101 Wuchereria bancrofti WUBG_12101 N 0.534
CpipJ_CPIJ012041 Culex pipiens CpipJ_CPIJ012041 N 0.532
BGIBMGA003081 Bombyx mori BGIBMGA003081 N 0.532
CPIJ012041 Culex quinquefasciatus CPIJ012041 N 0.532
ENSCSAG00000016751 Chlorocebus sabaeus ENSCSAG00000016751 N 0.532
SOX18 Dasypus novemcinctus ENSDNOG00000036237 N 0.532
ENSOANG00000011188 Ornithorhynchus anatinus ENSOANG00000011188 I 0.532
SOX18 Procavia capensis ENSPCAG00000015663 N 0.532
SOX18 Pan troglodytes ENSPTRG00000030459 I 0.532
L798_12046 Zootermopsis nevadensis L798_12046 N 0.532
Ogr11176 Ophisaurus gracilis Ogr11176 N 0.532
CLEC006960 Cimex lectularius CLEC006960 N 0.532
LDEC017494 Leptinotarsa decemlineata LDEC017494 N 0.532
AALB009867 Anopheles albimanus AALB009867 N 0.532
ACOM022799 Anopheles coluzzii ACOM022799 N 0.532
ACUA010594 Anopheles culicifacies ACUA010594 N 0.532
AEPI003629 Anopheles epiroticus AEPI003629 N 0.532
AFUN010198 Anopheles funestus AFUN010198 N 0.532
AMIN009302 Anopheles minimus AMIN009302 N 0.532
AQUA001261 Anopheles quadriannulatus AQUA001261 N 0.532
ALUE_0000245701 Ascaris lumbricoides ALUE_0000245701 N 0.532
Hmg20b Mus musculus ENSMUSG00000020232 D 0.525
ALUE_0000639901 Ascaris lumbricoides ALUE_0000639901 N 0.525
ENSAMXG00000017231 Astyanax mexicanus ENSAMXG00000017231 I 0.523
ENSAPLG00000010204 Anas platyrhynchos ENSAPLG00000010204 N 0.523
ENSMGAG00000006624 Meleagris gallopavo ENSMGAG00000006624 N 0.523
Sox17 Mus musculus ENSMUSG00000025902 D 0.523
SOX17 Sorex araneus ENSSARG00000009573 I 0.523
ENSTTRG00000015548 Tursiops truncatus ENSTTRG00000015548 I 0.523
GLOINDRAFT_335861 Rhizophagus irregularis GLOINDRAFT_335861 N 0.523
L798_00185 Zootermopsis nevadensis L798_00185 N 0.523
TcIL3000.10.440 Trypanosoma congolense TcIL3000.10.440 N 0.523
ENSBTAP00000027633-D1 Bos grunniens ENSBTAP00000027633-D1 I 0.523
PredSwiss_ASS2010_3779.1 Pneumocystis carinii PredSwiss_ASS2010_3779.1 N 0.523
PredSwiss_CON1835.1 Pneumocystis carinii PredSwiss_CON1835.1 N 0.523
EFA85451.1 Polysphondylium pallidum EFA85451.1 N 0.515
PITG_13146 Phytophthora infestans PITG_13146 N 0.509
LEF1 Tursiops truncatus ENSTTRG00000008109 N 0.508
PITG_13138 Phytophthora infestans PITG_13138 N 0.507
TVAG_114290 Trichomonas vaginalis TVAG_114290 N 0.505
BBX Sorex araneus ENSSARG00000008353 N 0.504
ECPE_0001383301 Echinostoma caproni ECPE_0001383301 N 0.498
HelroG68905 Helobdella robusta HelroG68905 N 0.495
M422DRAFT_54734 Sphaerobolus stellatus M422DRAFT_54734 N 0.492
HHAL000218-PA Halyomorpha halys HHAL000218-PA N 0.492
AAEL000771 Aedes aegypti AAEL000771 N 0.488
AGAP028091 Anopheles gambiae AGAP028091 N 0.488
ENSNLEG00000002693 Nomascus leucogenys ENSNLEG00000002693 N 0.488
ENSPMAG00000004519 Petromyzon marinus ENSPMAG00000004519 N 0.488
PHUM433280 Pediculus humanus PHUM433280 N 0.488
SINV16572 Solenopsis invicta SINV16572 N 0.488
TC009856 Tribolium castaneum TC009856 N 0.488
Ogr13852 Ophisaurus gracilis Ogr13852 N 0.488
ACUA012732 Anopheles culicifacies ACUA012732 N 0.488
AEPI007948 Anopheles epiroticus AEPI007948 N 0.488
AFUN009317 Anopheles funestus AFUN009317 N 0.488
AMAM023617 Anopheles maculatus AMAM023617 N 0.488
AMEC011653 Anopheles melas AMEC011653 N 0.488
AMEM002834 Anopheles merus AMEM002834 N 0.488
ASTEI06131 Anopheles stephensi ASTEI06131 N 0.488
HMEL013676 Heliconius melpomene HMEL013676 N 0.487
YQE_03817 Dendroctonus ponderosae YQE_03817 N 0.487
LDEC018263 Leptinotarsa decemlineata LDEC018263 N 0.487
ENSTSYG00000001164 Tarsius syrichta ENSTSYG00000001164 I 0.486
L898_g4879 Steinernema monticolum L898_g4879 N 0.486
ENSAPLG00000008530 Anas platyrhynchos ENSAPLG00000008530 N 0.485
ENSGALG00000023601 Gallus gallus ENSGALG00000023601 N 0.485
ENSMGAG00000006336 Meleagris gallopavo ENSMGAG00000006336 N 0.485
ISCW001638 Ixodes scapularis ISCW001638 N 0.485
LotgiG143673 Lottia gigantea LotgiG143673 N 0.485
TVAG_390840 Trichomonas vaginalis TVAG_390840 N 0.485
Afo_R011382 Aptenodytes forsteri Afo_R011382 N 0.485
Brh_R007868 Buceros rhinoceros Brh_R007868 N 0.485
CpipJ_CPIJ014017 Culex pipiens CpipJ_CPIJ014017 N 0.484
CPIJ014017 Culex quinquefasciatus CPIJ014017 N 0.484
DAPPUDRAFT_113704 Daphnia pulex DAPPUDRAFT_113704 N 0.479
SMAR007058 Strigamia maritima SMAR007058 N 0.479
PEQ_0000549401 Parascaris equorum PEQ_0000549401 N 0.479
ENSAPLG00000003216 Anas platyrhynchos ENSAPLG00000003216 N 0.477
ENSAPLG00000013168 Anas platyrhynchos ENSAPLG00000013168 I 0.477
SOX8 Callithrix jacchus ENSCJAG00000002684 I 0.477
SOX10 Echinops telfairi ENSETEG00000012633 I 0.477
SOX8 Echinops telfairi ENSETEG00000015470 N 0.477
SOX9 Echinops telfairi ENSETEG00000020237 I 0.477
SOX8 Felis catus ENSFCAG00000004219 N 0.477
ENSFCAG00000015685 Felis catus ENSFCAG00000015685 I 0.477
SOX8 Microcebus murinus ENSMICG00000011516 I 0.477
SOX9 Myotis lucifugus ENSMLUG00000030312 I 0.477
ENSSHAG00000008406 Sarcophilus harrisii ENSSHAG00000008406 I 0.477
SOX9 Tupaia belangeri ENSTBEG00000000175 N 0.477
sox9a Tetraodon nigroviridis ENSTNIG00000001901 N 0.477
ENSTSYG00000006321 Tarsius syrichta ENSTSYG00000006321 I 0.477
Afo_R012388 Aptenodytes forsteri Afo_R012388 N 0.477
Cla016375 Citrullus lanatus Cla016375 N 0.477
Cmyd_10006594 Chelonia mydas Cmyd_10006594 N 0.477
ENSP00000409273 Macaca fascicularis ENSP00000409273 I 0.477
Ogr00751 Ophisaurus gracilis Ogr00751 I 0.477
PK00252.1 Cannabis sativa PK00252.1 N 0.477
AATE016483 Anopheles atroparvus AATE016483 N 0.477
ACUA008827 Anopheles culicifacies ACUA008827 N 0.477
AEPI007652 Anopheles epiroticus AEPI007652 N 0.477
AFUN006689 Anopheles funestus AFUN006689 N 0.477
AMAM004028 Anopheles maculatus AMAM004028 N 0.477
AMEC007393 Anopheles melas AMEC007393 N 0.477
AMIN001220 Anopheles minimus AMIN001220 N 0.477
SOX18 Echinops telfairi ENSETEG00000001816 N 0.472
ENSPCAG00000014137 Procavia capensis ENSPCAG00000014137 N 0.466
EDI_065970 Entamoeba dispar EDI_065970 N 0.464
TCNE_0000669501 Toxocara canis TCNE_0000669501 N 0.460
M7I_1506 Glarea lozoyensis M7I_1506 N 0.458
Myotis_brandtii_TFAM_10031378 Myotis brandtii Myotis_brandtii_TFAM_10031378 N 0.458
SOX2 Felis catus ENSFCAG00000029205 I 0.457
SOX2 Procavia capensis ENSPCAG00000003690 I 0.457
SINV19749 Solenopsis invicta SINV19749 N 0.457
ADIR005631 Anopheles dirus ADIR005631 N 0.457
ASTEI06408 Anopheles stephensi ASTEI06408 N 0.457
DILT_0001419401 Diphyllobothrium latum DILT_0001419401 N 0.456
TCF7L2 Vicugna pacos ENSVPAG00000008158 N 0.451
CBN25334 Caenorhabditis brenneri CBN25334 N 0.448
L798_05432 Zootermopsis nevadensis L798_05432 N 0.448
MESCA006364 Megaselia scalaris MESCA006364 N 0.448
yakG000714 Bos grunniens yakG000714 N 0.442
Sox6 Dipodomys ordii ENSDORG00000013073 N 0.439
SOX9 Ochotona princeps ENSOPRG00000007860 N 0.439
ENSVPAG00000008729 Vicugna pacos ENSVPAG00000008729 N 0.439
TRIUR3_17277 Triticum urartu TRIUR3_17277 N 0.439
68433 Aureococcus anophagefferens 68433 N 0.439
ENSOANG00000002448 Ornithorhynchus anatinus ENSOANG00000002448 I 0.438
AMEM007694 Anopheles merus AMEM007694 N 0.438
GLOINDRAFT_271935 Rhizophagus irregularis GLOINDRAFT_271935 N 0.437
DAPPUDRAFT_259784 Daphnia pulex DAPPUDRAFT_259784 N 0.431
GPUH_0000499601 Gongylonema pulchrum GPUH_0000499601 N 0.431
CBN19486 Caenorhabditis brenneri CBN19486 N 0.429
GLYMA20G01570 Glycine max GLYMA20G01570 N 0.429
M404DRAFT_787968 Pisolithus tinctorius M404DRAFT_787968 N 0.429
UCREL1_237 Eutypa lata UCREL1_237 N 0.429
LbrM.21.1660 Leishmania braziliensis LbrM.21.1660 N 0.429
Afo_R012670 Aptenodytes forsteri Afo_R012670 N 0.429
HHAL001583-PA Halyomorpha halys HHAL001583-PA N 0.429
CMQ_5875 Grosmannia clavigera CMQ_5875 N 0.428
YQE_08562 Dendroctonus ponderosae YQE_08562 N 0.428
MELLADRAFT_86211 Melampsora laricipopulina MELLADRAFT_86211 N 0.419
RPRC001038 Rhodnius prolixus RPRC001038 N 0.419
PPA11045 Pristionchus pacificus PPA11045 N 0.417