CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GPUH_0000499601
(
Gongylonema pulchrum
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
GPUH_0000499601
T336361_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GPUH_0000499601-mRNA-1
Sox
6
44
LLLQLGLQWRQLSDSEKAPYIAEAERLRVMHMKEYPDYK
Links
Other
Sox
family TFs
Other
Gongylonema pulchrum
TFs
219 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
HHAL001293-PA
Halyomorpha halys
HHAL001293-PA
N
0.660
HHAL001583-PA
Halyomorpha halys
HHAL001583-PA
N
0.644
AATE015714
Anopheles atroparvus
AATE015714
N
0.633
ALUE_0000639901
Ascaris lumbricoides
ALUE_0000639901
N
0.632
Afo_R012670
Aptenodytes forsteri
Afo_R012670
N
0.625
AMEM007694
Anopheles merus
AMEM007694
N
0.621
AMIN009302
Anopheles minimus
AMIN009302
N
0.621
ACUA010594
Anopheles culicifacies
ACUA010594
N
0.621
AEPI003629
Anopheles epiroticus
AEPI003629
N
0.621
ADIR005631
Anopheles dirus
ADIR005631
N
0.621
BGIBMGA003081
Bombyx mori
BGIBMGA003081
N
0.621
CLEC006960
Cimex lectularius
CLEC006960
N
0.621
ASTEI06408
Anopheles stephensi
ASTEI06408
N
0.621
L798_12046
Zootermopsis nevadensis
L798_12046
N
0.621
AFUN010198
Anopheles funestus
AFUN010198
N
0.621
YQE_08562
Dendroctonus ponderosae
YQE_08562
N
0.618
CpipJ_CPIJ012041
Culex pipiens
CpipJ_CPIJ012041
N
0.615
AALB009867
Anopheles albimanus
AALB009867
N
0.615
LDEC017494
Leptinotarsa decemlineata
LDEC017494
N
0.615
ACOM022799
Anopheles coluzzii
ACOM022799
N
0.615
AQUA001261
Anopheles quadriannulatus
AQUA001261
N
0.615
CPIJ012041
Culex quinquefasciatus
CPIJ012041
N
0.615
ENSBTAP00000027633-D1
Bos grunniens
ENSBTAP00000027633-D1
I
0.608
ENSOANG00000002448
Ornithorhynchus anatinus
ENSOANG00000002448
I
0.604
SOX2
Procavia capensis
ENSPCAG00000003690
I
0.601
ENSOANG00000011188
Ornithorhynchus anatinus
ENSOANG00000011188
I
0.601
SOX2
Felis catus
ENSFCAG00000029205
I
0.601
SOX18
Dasypus novemcinctus
ENSDNOG00000036237
N
0.597
ENSAPLG00000010204
Anas platyrhynchos
ENSAPLG00000010204
N
0.597
ENSMGAG00000006624
Meleagris gallopavo
ENSMGAG00000006624
N
0.597
ALUE_0000245701
Ascaris lumbricoides
ALUE_0000245701
N
0.594
ENSTTRG00000015548
Tursiops truncatus
ENSTTRG00000015548
I
0.593
ENSAMXG00000017231
Astyanax mexicanus
ENSAMXG00000017231
I
0.593
SOX18
Procavia capensis
ENSPCAG00000015663
N
0.591
ENSCSAG00000016751
Chlorocebus sabaeus
ENSCSAG00000016751
N
0.590
Sox17
Mus musculus
ENSMUSG00000025902
D
0.590
Ogr11176
Ophisaurus gracilis
Ogr11176
N
0.586
SOX17
Sorex araneus
ENSSARG00000009573
I
0.584
SOX18
Pan troglodytes
ENSPTRG00000030459
I
0.584
SINV19749
Solenopsis invicta
SINV19749
N
0.575
RPRC001038
Rhodnius prolixus
RPRC001038
N
0.559
YQE_13041
Dendroctonus ponderosae
YQE_13041
N
0.557
CpipJ_CPIJ012498
Culex pipiens
CpipJ_CPIJ012498
N
0.557
SINV16572
Solenopsis invicta
SINV16572
N
0.557
ACEP25851
Atta cephalotes
ACEP25851
N
0.557
CPIJ012498
Culex quinquefasciatus
CPIJ012498
N
0.557
AGAP028091
Anopheles gambiae
AGAP028091
N
0.557
PHUM433280
Pediculus humanus
PHUM433280
N
0.555
SOX8
Echinops telfairi
ENSETEG00000015470
N
0.553
Afo_R012388
Aptenodytes forsteri
Afo_R012388
N
0.553
Cmyd_10006594
Chelonia mydas
Cmyd_10006594
N
0.553
SOX8
Callithrix jacchus
ENSCJAG00000002684
I
0.553
ENSAPLG00000003216
Anas platyrhynchos
ENSAPLG00000003216
N
0.553
ENSTSYG00000006321
Tarsius syrichta
ENSTSYG00000006321
I
0.553
SOX8
Microcebus murinus
ENSMICG00000011516
I
0.553
Ogr00751
Ophisaurus gracilis
Ogr00751
I
0.553
SOX8
Felis catus
ENSFCAG00000004219
N
0.553
L798_05432
Zootermopsis nevadensis
L798_05432
N
0.552
AEPI007948
Anopheles epiroticus
AEPI007948
N
0.551
SMAR010125
Strigamia maritima
SMAR010125
N
0.551
AMAM023617
Anopheles maculatus
AMAM023617
N
0.551
ADIR009661
Anopheles dirus
ADIR009661
N
0.551
ACOM026653
Anopheles coluzzii
ACOM026653
N
0.551
AMEM002834
Anopheles merus
AMEM002834
N
0.551
AALB009772
Anopheles albimanus
AALB009772
N
0.551
AQUA005880
Anopheles quadriannulatus
AQUA005880
N
0.551
ASIS001889
Anopheles sinensis
ASIS001889
N
0.551
AFUN009317
Anopheles funestus
AFUN009317
N
0.551
ASTEI06131
Anopheles stephensi
ASTEI06131
N
0.551
ACUA012732
Anopheles culicifacies
ACUA012732
N
0.551
AMEC011653
Anopheles melas
AMEC011653
N
0.551
TC009856
Tribolium castaneum
TC009856
N
0.551
AAEL000771
Aedes aegypti
AAEL000771
N
0.551
WALSEDRAFT_59420
Wallemia sebi
WALSEDRAFT_59420
N
0.550
MESCA006364
Megaselia scalaris
MESCA006364
N
0.550
LotgiG143673
Lottia gigantea
LotgiG143673
N
0.550
LDEC018263
Leptinotarsa decemlineata
LDEC018263
N
0.549
ENSAPLG00000013168
Anas platyrhynchos
ENSAPLG00000013168
I
0.548
ENSSHAG00000008406
Sarcophilus harrisii
ENSSHAG00000008406
I
0.548
sox9a
Tetraodon nigroviridis
ENSTNIG00000001901
N
0.548
BGLB010902
Biomphalaria glabrata
BGLB010902
N
0.548
SMAR007058
Strigamia maritima
SMAR007058
N
0.548
SOX9
Myotis lucifugus
ENSMLUG00000030312
I
0.548
ENSP00000409273
Macaca fascicularis
ENSP00000409273
I
0.548
ENSFCAG00000015685
Felis catus
ENSFCAG00000015685
I
0.548
MPER_06248
Moniliophthora perniciosa
MPER_06248
N
0.548
ISCW001638
Ixodes scapularis
ISCW001638
N
0.547
SOX9
Echinops telfairi
ENSETEG00000020237
I
0.546
YQE_03817
Dendroctonus ponderosae
YQE_03817
N
0.546
SOX10
Echinops telfairi
ENSETEG00000012633
I
0.546
SOX9
Tupaia belangeri
ENSTBEG00000000175
N
0.546
Minc18937
Meloidogyne incognita
Minc18937
N
0.545
HMEL013676
Heliconius melpomene
HMEL013676
N
0.544
PEQ_0000549401
Parascaris equorum
PEQ_0000549401
N
0.542
PredSwiss_ASS2010_3779.1
Pneumocystis carinii
PredSwiss_ASS2010_3779.1
N
0.541
PredSwiss_CON1835.1
Pneumocystis carinii
PredSwiss_CON1835.1
N
0.541
ENSTSYG00000001164
Tarsius syrichta
ENSTSYG00000001164
I
0.541
PPAI005428
Phlebotomus papatasi
PPAI005428
N
0.541
L898_g4879
Steinernema monticolum
L898_g4879
N
0.541
MESCA012239
Megaselia scalaris
MESCA012239
I
0.540
M404DRAFT_787968
Pisolithus tinctorius
M404DRAFT_787968
N
0.538
HHAL000218-PA
Halyomorpha halys
HHAL000218-PA
N
0.537
DAPPUDRAFT_113704
Daphnia pulex
DAPPUDRAFT_113704
N
0.534
L798_00185
Zootermopsis nevadensis
L798_00185
N
0.534
Ogr08337
Ophisaurus gracilis
Ogr08337
N
0.533
AATE016483
Anopheles atroparvus
AATE016483
N
0.532
ACUA008827
Anopheles culicifacies
ACUA008827
N
0.528
UCREL1_237
Eutypa lata
UCREL1_237
N
0.527
TVAG_390840
Trichomonas vaginalis
TVAG_390840
N
0.525
AEPI007652
Anopheles epiroticus
AEPI007652
N
0.525
AMEC007393
Anopheles melas
AMEC007393
N
0.525
AFUN006689
Anopheles funestus
AFUN006689
N
0.525
AMIN001220
Anopheles minimus
AMIN001220
N
0.525
CpipJ_CPIJ014017
Culex pipiens
CpipJ_CPIJ014017
N
0.525
AMAM004028
Anopheles maculatus
AMAM004028
N
0.525
CPIJ014017
Culex quinquefasciatus
CPIJ014017
N
0.525
GLOTRDRAFT_8101
Gloeophyllum trabeum
GLOTRDRAFT_8101
N
0.522
SCLCIDRAFT_59496
Scleroderma citrinum
SCLCIDRAFT_59496
N
0.522
Myotis_brandtii_TFAM_10031378
Myotis brandtii
Myotis_brandtii_TFAM_10031378
N
0.521
LCUP001586
Lucilia cuprina
LCUP001586
N
0.519
PLEOSDRAFT_1017219
Pleurotus ostreatus
PLEOSDRAFT_1017219
N
0.518
LACBIDRAFT_169971
Laccaria bicolor
LACBIDRAFT_169971
N
0.515
Brh_R004116
Buceros rhinoceros
Brh_R004116
N
0.515
K443DRAFT_58201
Laccaria amethystina
K443DRAFT_58201
N
0.515
Hba_21281
Heterorhabditis bacteriophora
Hba_21281
N
0.505
sox-2
Caenorhabditis elegans
WBGene00004949
I
0.505
67303
Aureococcus anophagefferens
67303
N
0.503
GLOINDRAFT_271935
Rhizophagus irregularis
GLOINDRAFT_271935
N
0.503
ANCDUO_13942
Ancylostoma duodenale
ANCDUO_13942
N
0.502
OESDEN_19415
Oesophagostomum dentatum
OESDEN_19415
N
0.502
Hmg20b
Mus musculus
ENSMUSG00000020232
D
0.497
SMU15030186
Schmidtea mediterranea
SMU15030186
N
0.496
SOX18
Callithrix jacchus
ENSCJAG00000022379
N
0.495
TCNE_0000669501
Toxocara canis
TCNE_0000669501
N
0.495
GLYMA20G01570
Glycine max
GLYMA20G01570
N
0.495
GPLIN_000970900
Globodera pallida
GPLIN_000970900
N
0.495
ENSAMXG00000003325
Astyanax mexicanus
ENSAMXG00000003325
N
0.494
WUBG_10398
Wuchereria bancrofti
WUBG_10398
N
0.488
GLOINDRAFT_83691
Rhizophagus irregularis
GLOINDRAFT_83691
N
0.486
ACEP10857
Atta cephalotes
ACEP10857
N
0.486
fgenesh1_pg.C_scaffold_11000031
Sporobolomyces roseus
fgenesh1_pg.C_scaffold_11000031
N
0.486
HmN_000301900
Hymenolepis microstoma
HmN_000301900
N
0.482
yakG000714
Bos grunniens
yakG000714
N
0.482
Myotis_brandtii_Hmgb2_10029741
Myotis brandtii
Myotis_brandtii_Hmgb2_10029741
N
0.481
ENSPMAG00000004519
Petromyzon marinus
ENSPMAG00000004519
N
0.479
GLOINDRAFT_335861
Rhizophagus irregularis
GLOINDRAFT_335861
N
0.476
VDBG_04936
Verticillium alfalfae
VDBG_04936
N
0.475
VDBG_04936
Verticillium albo atrum
VDBG_04936
N
0.475
Myotis_brandtii_TIMM8A_10019481
Myotis brandtii
Myotis_brandtii_TIMM8A_10019481
N
0.474
D918_08317
Trichuris suis
D918_08317
N
0.473
Ogr13852
Ophisaurus gracilis
Ogr13852
N
0.472
ACHR008996
Anopheles christyi
ACHR008996
N
0.471
EFA85451.1
Polysphondylium pallidum
EFA85451.1
N
0.469
DDB_G0287073
Dictyostelium discoideum
DDB_G0287073
N
0.469
SOX12
Dasypus novemcinctus
ENSDNOG00000044763
N
0.469
PSEUBRA_SCAF2g02551
Pseudozyma brasiliensis
PSEUBRA_SCAF2g02551
N
0.467
HelroG68905
Helobdella robusta
HelroG68905
N
0.466
Hsal_05005--XP_001122373.1_APIME
Harpegnathos saltator
Hsal_05005--XP_001122373.1_APIME
N
0.466
Hsal_04827--XP_001122993.1_APIME
Harpegnathos saltator
Hsal_04827--XP_001122993.1_APIME
N
0.465
Sjc_0107520
Schistosoma japonicum
Sjc_0107520
N
0.464
PXEA_0002992801
Protopolystoma xenopodis
PXEA_0002992801
N
0.464
AARA000825
Anopheles arabiensis
AARA000825
N
0.462
CBN19486
Caenorhabditis brenneri
CBN19486
N
0.462
estExt_fgeneshDP_kg.C_1020010
Dictyostelium purpureum
estExt_fgeneshDP_kg.C_1020010
N
0.462
PPAI003639
Phlebotomus papatasi
PPAI003639
N
0.461
LDEC019307
Leptinotarsa decemlineata
LDEC019307
N
0.460
ENSNLEG00000002693
Nomascus leucogenys
ENSNLEG00000002693
N
0.459
ENSLOCG00000011834
Lepisosteus oculatus
ENSLOCG00000011834
I
0.455
GLOINDRAFT_193164
Rhizophagus irregularis
GLOINDRAFT_193164
N
0.455
JL09_g5343
Pichia kudriavzevii
JL09_g5343
N
0.453
SINV24165
Solenopsis invicta
SINV24165
N
0.453
SOX8
Equus caballus
ENSECAG00000016320
I
0.452
DAPPUDRAFT_259784
Daphnia pulex
DAPPUDRAFT_259784
N
0.451
SPER_0001708101
Spirometra erinaceieuropaei
SPER_0001708101
N
0.450
SPER_0001952401
Spirometra erinaceieuropaei
SPER_0001952401
N
0.450
GLOINDRAFT_346686
Rhizophagus irregularis
GLOINDRAFT_346686
N
0.450
TcIL3000.10.440
Trypanosoma congolense
TcIL3000.10.440
N
0.450
ENSAPLG00000008530
Anas platyrhynchos
ENSAPLG00000008530
N
0.448
ENSFALG00000011068
Ficedula albicollis
ENSFALG00000011068
N
0.448
ENSMGAG00000006336
Meleagris gallopavo
ENSMGAG00000006336
N
0.448
Brh_R007868
Buceros rhinoceros
Brh_R007868
N
0.448
Gfo_R008143
Geospiza fortis
Gfo_R008143
N
0.448
Afo_R011382
Aptenodytes forsteri
Afo_R011382
N
0.448
Aan_R006397
Calypte anna
Aan_R006397
N
0.448
ENSGALG00000023601
Gallus gallus
ENSGALG00000023601
N
0.448
ENSPANG00000005859
Papio anubis
ENSPANG00000005859
I
0.447
PPA11045
Pristionchus pacificus
PPA11045
N
0.446
LbrM.21.1660
Leishmania braziliensis
LbrM.21.1660
N
0.444
Gorai.005G106800
Gossypium raimondii
Gorai.005G106800
N
0.444
POSPLDRAFT_103238
Postia placenta
POSPLDRAFT_103238
N
0.444
CNM02020
Cryptococcus neoformans
CNM02020
N
0.443
M422DRAFT_54734
Sphaerobolus stellatus
M422DRAFT_54734
N
0.443
ENSPSIG00000016857
Pelodiscus sinensis
ENSPSIG00000016857
N
0.442
GLOINDRAFT_25375
Rhizophagus irregularis
GLOINDRAFT_25375
N
0.441
F443_09320
Phytophthora parasitica
F443_09320
N
0.440
EDI_065970
Entamoeba dispar
EDI_065970
N
0.437
DILT_0001419401
Diphyllobothrium latum
DILT_0001419401
N
0.436
PK00252.1
Cannabis sativa
PK00252.1
N
0.435
UCREL1_749
Eutypa lata
UCREL1_749
N
0.435
SapurV1A.0237s0190
Salix purpurea
SapurV1A.0237s0190
N
0.433
Myotis_brandtii_SOX2_10019709
Myotis brandtii
Myotis_brandtii_SOX2_10019709
I
0.432
AMEC000538
Anopheles melas
AMEC000538
I
0.432
PTTG_00444
Puccinia triticina
PTTG_00444
N
0.432
fgenesh1_pm.C_scaffold_23000166
Phytophthora capsici
fgenesh1_pm.C_scaffold_23000166
N
0.431
Phyra76615
Phytophthora ramorum
Phyra76615
N
0.431
Physo127875
Phytophthora sojae
Physo127875
N
0.431
fgenesh_scip_prom.28083.3150
Phytophthora lateralis
fgenesh_scip_prom.28083.3150
N
0.431
GB40963
Apis mellifera
GB40963
N
0.430
e_gw.60.194.1
Branchiostoma floridae
e_gw.60.194.1
N
0.429
CBN25334
Caenorhabditis brenneri
CBN25334
N
0.429
ENSSTOG00000011011
Ictidomys tridecemlineatus
ENSSTOG00000011011
I
0.426
MELLADRAFT_86211
Melampsora laricipopulina
MELLADRAFT_86211
N
0.426
Cla016375
Citrullus lanatus
Cla016375
N
0.425
WUBG_12101
Wuchereria bancrofti
WUBG_12101
N
0.422
ADIR006820
Anopheles dirus
ADIR006820
N
0.422
M7I_1506
Glarea lozoyensis
M7I_1506
N
0.421
CMQ_5875
Grosmannia clavigera
CMQ_5875
N
0.420
TRE_0000259001
Trichobilharzia regenti
TRE_0000259001
N
0.420
ENSOARG00000000906
Ovis aries
ENSOARG00000000906
I
0.418