CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MELLADRAFT_86211
(
Melampsora laricipopulina
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
MELLADRAFT_86211
T331243_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EGG06955
Sox
56
83
THHNQEVSKMWKKLSKDEKDVFQDPYFF
Links
Other
Sox
family TFs
Other
Melampsora laricipopulina
TFs
112 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CBN19486
Caenorhabditis brenneri
CBN19486
N
0.598
TcIL3000.10.440
Trypanosoma congolense
TcIL3000.10.440
N
0.532
TVAG_468590
Trichomonas vaginalis
TVAG_468590
N
0.525
ENSAPLG00000008530
Anas platyrhynchos
ENSAPLG00000008530
N
0.524
ENSFALG00000011068
Ficedula albicollis
ENSFALG00000011068
N
0.524
ENSGALG00000023601
Gallus gallus
ENSGALG00000023601
N
0.524
ENSMGAG00000006336
Meleagris gallopavo
ENSMGAG00000006336
N
0.524
Aan_R006397
Calypte anna
Aan_R006397
N
0.524
Afo_R011382
Aptenodytes forsteri
Afo_R011382
N
0.524
Brh_R007868
Buceros rhinoceros
Brh_R007868
N
0.524
Gfo_R008143
Geospiza fortis
Gfo_R008143
N
0.524
GPLIN_001054700
Globodera pallida
GPLIN_001054700
N
0.519
ENSPSIG00000016857
Pelodiscus sinensis
ENSPSIG00000016857
N
0.517
LbrM.21.1660
Leishmania braziliensis
LbrM.21.1660
N
0.517
SINV19749
Solenopsis invicta
SINV19749
N
0.497
M7I_1506
Glarea lozoyensis
M7I_1506
N
0.489
CBN25334
Caenorhabditis brenneri
CBN25334
N
0.483
Gorai.005G106800
Gossypium raimondii
Gorai.005G106800
N
0.483
MTR_6g048860
Medicago truncatula
MTR_6g048860
N
0.480
GH17483
Drosophila grimshawi
FBgn0124953
N
0.478
PPA22145
Pristionchus pacificus
PPA22145
N
0.476
orange1.1g036321m.g
Citrus sinensis
orange1.1g036321m.g
N
0.467
AALB009772
Anopheles albimanus
AALB009772
N
0.463
EDI_065970
Entamoeba dispar
EDI_065970
N
0.461
DAPPUDRAFT_259784
Daphnia pulex
DAPPUDRAFT_259784
N
0.459
GA28914
Drosophila pseudoobscura
FBgn0250273
N
0.459
PTTG_03070
Puccinia triticina
PTTG_03070
N
0.459
OLONG_013579
Oryza longistaminata
OLONG_013579
N
0.455
fgenesh_scip_prom.28083.3150
Phytophthora lateralis
fgenesh_scip_prom.28083.3150
N
0.452
Physo127875
Phytophthora sojae
Physo127875
N
0.452
fgenesh1_pm.C_scaffold_23000166
Phytophthora capsici
fgenesh1_pm.C_scaffold_23000166
N
0.452
CMQ_5875
Grosmannia clavigera
CMQ_5875
N
0.448
SMU15030327
Schmidtea mediterranea
SMU15030327
N
0.447
TRAES3BF116200180CFD_g
Triticum aestivum
TRAES3BF116200180CFD_g
N
0.446
GLOINDRAFT_31865
Rhizophagus irregularis
GLOINDRAFT_31865
N
0.445
M422DRAFT_54734
Sphaerobolus stellatus
M422DRAFT_54734
N
0.445
EMIHUDRAFT_107556
Emiliania huxleyi
EMIHUDRAFT_107556
N
0.442
CGOC_0001370301
Cylicostephanus goldi
CGOC_0001370301
N
0.437
Myotis_brandtii_TFAM_10031378
Myotis brandtii
Myotis_brandtii_TFAM_10031378
N
0.434
DILT_0001419401
Diphyllobothrium latum
DILT_0001419401
N
0.432
ENSAPLG00000010204
Anas platyrhynchos
ENSAPLG00000010204
N
0.428
SOX18
Dasypus novemcinctus
ENSDNOG00000036237
N
0.428
SOX2
Felis catus
ENSFCAG00000029205
I
0.428
ENSMGAG00000006624
Meleagris gallopavo
ENSMGAG00000006624
N
0.428
ENSOANG00000011188
Ornithorhynchus anatinus
ENSOANG00000011188
I
0.428
SOX2
Procavia capensis
ENSPCAG00000003690
I
0.428
SOX18
Procavia capensis
ENSPCAG00000015663
N
0.428
GLYMA20G01570
Glycine max
GLYMA20G01570
N
0.428
SPU_021871
Strongylocentrotus purpuratus
SPU_021871
N
0.428
YQE_08562
Dendroctonus ponderosae
YQE_08562
N
0.428
TVAG_390840
Trichomonas vaginalis
TVAG_390840
N
0.428
Afo_R012670
Aptenodytes forsteri
Afo_R012670
N
0.428
AALB009867
Anopheles albimanus
AALB009867
N
0.428
OESDEN_19415
Oesophagostomum dentatum
OESDEN_19415
N
0.428
DAPPUDRAFT_336128
Daphnia pulex
DAPPUDRAFT_336128
N
0.426
GLOINDRAFT_335861
Rhizophagus irregularis
GLOINDRAFT_335861
N
0.426
MPER_06248
Moniliophthora perniciosa
MPER_06248
N
0.426
ENSBTAP00000027633-D1
Bos grunniens
ENSBTAP00000027633-D1
I
0.426
Myotis_brandtii_Hmgb2_10029741
Myotis brandtii
Myotis_brandtii_Hmgb2_10029741
N
0.426
Ogr11176
Ophisaurus gracilis
Ogr11176
N
0.426
PredSwiss_ASS2010_3779.1
Pneumocystis carinii
PredSwiss_ASS2010_3779.1
N
0.426
PredSwiss_CON1835.1
Pneumocystis carinii
PredSwiss_CON1835.1
N
0.426
GPUH_0000499601
Gongylonema pulchrum
GPUH_0000499601
N
0.426
TCNE_0000669501
Toxocara canis
TCNE_0000669501
N
0.426
CpipJ_CPIJ012041
Culex pipiens
CpipJ_CPIJ012041
N
0.422
BGIBMGA003081
Bombyx mori
BGIBMGA003081
N
0.422
CPIJ012041
Culex quinquefasciatus
CPIJ012041
N
0.422
ENSAMXG00000017231
Astyanax mexicanus
ENSAMXG00000017231
I
0.422
ENSCSAG00000016751
Chlorocebus sabaeus
ENSCSAG00000016751
N
0.422
Sox17
Mus musculus
ENSMUSG00000025902
D
0.422
ENSOANG00000002448
Ornithorhynchus anatinus
ENSOANG00000002448
I
0.422
SOX18
Pan troglodytes
ENSPTRG00000030459
I
0.422
SOX17
Sorex araneus
ENSSARG00000009573
I
0.422
ENSTTRG00000015548
Tursiops truncatus
ENSTTRG00000015548
I
0.422
L798_00185
Zootermopsis nevadensis
L798_00185
N
0.422
L798_12046
Zootermopsis nevadensis
L798_12046
N
0.422
MESCA006364
Megaselia scalaris
MESCA006364
N
0.422
RPRC001038
Rhodnius prolixus
RPRC001038
N
0.422
yakG000714
Bos grunniens
yakG000714
N
0.422
CLEC006960
Cimex lectularius
CLEC006960
N
0.422
HHAL001583-PA
Halyomorpha halys
HHAL001583-PA
N
0.422
LDEC017494
Leptinotarsa decemlineata
LDEC017494
N
0.422
ACOM022799
Anopheles coluzzii
ACOM022799
N
0.422
ACUA010594
Anopheles culicifacies
ACUA010594
N
0.422
ADIR005631
Anopheles dirus
ADIR005631
N
0.422
AEPI003629
Anopheles epiroticus
AEPI003629
N
0.422
AFUN010198
Anopheles funestus
AFUN010198
N
0.422
AMEM007694
Anopheles merus
AMEM007694
N
0.422
AMIN009302
Anopheles minimus
AMIN009302
N
0.422
AQUA001261
Anopheles quadriannulatus
AQUA001261
N
0.422
ASTEI06408
Anopheles stephensi
ASTEI06408
N
0.422
ALUE_0000245701
Ascaris lumbricoides
ALUE_0000245701
N
0.422
ANCDUO_13942
Ancylostoma duodenale
ANCDUO_13942
N
0.422
DDB_G0287073
Dictyostelium discoideum
DDB_G0287073
N
0.419
Hmg20b
Mus musculus
ENSMUSG00000020232
D
0.419
F443_09320
Phytophthora parasitica
F443_09320
N
0.419
JL09_g5343
Pichia kudriavzevii
JL09_g5343
N
0.419
L798_05432
Zootermopsis nevadensis
L798_05432
N
0.419
M404DRAFT_787968
Pisolithus tinctorius
M404DRAFT_787968
N
0.419
Phyra76615
Phytophthora ramorum
Phyra76615
N
0.419
UCREL1_237
Eutypa lata
UCREL1_237
N
0.419
Myotis_brandtii_TIMM8A_10019481
Myotis brandtii
Myotis_brandtii_TIMM8A_10019481
N
0.419
67303
Aureococcus anophagefferens
67303
N
0.419
estExt_fgeneshDP_kg.C_1020010
Dictyostelium purpureum
estExt_fgeneshDP_kg.C_1020010
N
0.419
Sakowv30045438m.g
Saccoglossus kowalevskii
Sakowv30045438m.g
N
0.419
EFA85451.1
Polysphondylium pallidum
EFA85451.1
N
0.419
Minc18937
Meloidogyne incognita
Minc18937
N
0.419
ALUE_0000639901
Ascaris lumbricoides
ALUE_0000639901
N
0.419
HmN_000301900
Hymenolepis microstoma
HmN_000301900
N
0.419
SERLA73DRAFT_158240
Serpula lacrymans
SERLA73DRAFT_158240
N
0.417
fgeneshPB_pg.10__1
Phycomyces blakesleeanus
fgeneshPB_pg.10__1
N
0.415
fgeneshPB_pg.46__7
Phycomyces blakesleeanus
fgeneshPB_pg.46__7
N
0.415