CBN25334 (Caenorhabditis brenneri)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 CBN25334 T326914_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
CBN25334 Sox 240 275

Links

Other Sox family TFs
Other Caenorhabditis brenneri TFs

137 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Gorai.005G106800 Gossypium raimondii Gorai.005G106800 N 0.539
ENSAPLG00000008530 Anas platyrhynchos ENSAPLG00000008530 N 0.531
ENSGALG00000023601 Gallus gallus ENSGALG00000023601 N 0.531
ENSMGAG00000006336 Meleagris gallopavo ENSMGAG00000006336 N 0.531
Aan_R006397 Calypte anna Aan_R006397 N 0.531
Afo_R011382 Aptenodytes forsteri Afo_R011382 N 0.531
Brh_R007868 Buceros rhinoceros Brh_R007868 N 0.531
orange1.1g036321m.g Citrus sinensis orange1.1g036321m.g N 0.529
ENSFALG00000011068 Ficedula albicollis ENSFALG00000011068 N 0.528
ENSPSIG00000016857 Pelodiscus sinensis ENSPSIG00000016857 N 0.528
Gfo_R008143 Geospiza fortis Gfo_R008143 N 0.528
LbrM.21.1660 Leishmania braziliensis LbrM.21.1660 N 0.520
TcIL3000.10.440 Trypanosoma congolense TcIL3000.10.440 N 0.512
CBN19486 Caenorhabditis brenneri CBN19486 N 0.502
estExt_fgenesh1_kg.C_340020 Phytophthora capsici estExt_fgenesh1_kg.C_340020 N 0.498
L798_00185 Zootermopsis nevadensis L798_00185 N 0.494
DAPPUDRAFT_259784 Daphnia pulex DAPPUDRAFT_259784 N 0.491
fgenesh_scip_prom.28083.3150 Phytophthora lateralis fgenesh_scip_prom.28083.3150 N 0.488
Physo127875 Phytophthora sojae Physo127875 N 0.488
fgenesh1_pm.C_scaffold_23000166 Phytophthora capsici fgenesh1_pm.C_scaffold_23000166 N 0.488
M422DRAFT_54734 Sphaerobolus stellatus M422DRAFT_54734 N 0.483
M7I_1506 Glarea lozoyensis M7I_1506 N 0.483
MELLADRAFT_86211 Melampsora laricipopulina MELLADRAFT_86211 N 0.483
Phyra76402 Phytophthora ramorum Phyra76402 N 0.481
EDI_065970 Entamoeba dispar EDI_065970 N 0.481
TCNE_0000669501 Toxocara canis TCNE_0000669501 N 0.480
GLOINDRAFT_31865 Rhizophagus irregularis GLOINDRAFT_31865 N 0.476
L798_05432 Zootermopsis nevadensis L798_05432 N 0.475
TVAG_390840 Trichomonas vaginalis TVAG_390840 N 0.475
HmN_000301900 Hymenolepis microstoma HmN_000301900 N 0.475
OESDEN_19415 Oesophagostomum dentatum OESDEN_19415 N 0.475
yakG000714 Bos grunniens yakG000714 N 0.472
67303 Aureococcus anophagefferens 67303 N 0.469
GLYMA20G01570 Glycine max GLYMA20G01570 N 0.466
PredSwiss_ASS2010_3779.1 Pneumocystis carinii PredSwiss_ASS2010_3779.1 N 0.463
PredSwiss_CON1835.1 Pneumocystis carinii PredSwiss_CON1835.1 N 0.463
DDB_G0287073 Dictyostelium discoideum DDB_G0287073 N 0.462
GLOINDRAFT_335861 Rhizophagus irregularis GLOINDRAFT_335861 N 0.460
MESCA006364 Megaselia scalaris MESCA006364 N 0.457
Myotis_brandtii_Hmgb2_10029741 Myotis brandtii Myotis_brandtii_Hmgb2_10029741 N 0.457
Minc18937 Meloidogyne incognita Minc18937 N 0.457
GH17483 Drosophila grimshawi FBgn0124953 N 0.456
CMQ_5875 Grosmannia clavigera CMQ_5875 N 0.455
CpipJ_CPIJ012041 Culex pipiens CpipJ_CPIJ012041 N 0.454
BGIBMGA003081 Bombyx mori BGIBMGA003081 N 0.454
CPIJ012041 Culex quinquefasciatus CPIJ012041 N 0.454
Sox17 Mus musculus ENSMUSG00000025902 D 0.454
SOX17 Sorex araneus ENSSARG00000009573 I 0.454
ENSTTRG00000015548 Tursiops truncatus ENSTTRG00000015548 I 0.454
F443_09320 Phytophthora parasitica F443_09320 N 0.454
JL09_g5343 Pichia kudriavzevii JL09_g5343 N 0.454
L798_12046 Zootermopsis nevadensis L798_12046 N 0.454
SINV19749 Solenopsis invicta SINV19749 N 0.454
Ogr11176 Ophisaurus gracilis Ogr11176 N 0.454
CLEC006960 Cimex lectularius CLEC006960 N 0.454
LDEC017494 Leptinotarsa decemlineata LDEC017494 N 0.454
AALB009867 Anopheles albimanus AALB009867 N 0.454
ACOM022799 Anopheles coluzzii ACOM022799 N 0.454
ACUA010594 Anopheles culicifacies ACUA010594 N 0.454
ADIR005631 Anopheles dirus ADIR005631 N 0.454
AEPI003629 Anopheles epiroticus AEPI003629 N 0.454
AFUN010198 Anopheles funestus AFUN010198 N 0.454
AMIN009302 Anopheles minimus AMIN009302 N 0.454
AQUA001261 Anopheles quadriannulatus AQUA001261 N 0.454
ASTEI06408 Anopheles stephensi ASTEI06408 N 0.454
ALUE_0000639901 Ascaris lumbricoides ALUE_0000639901 N 0.454
Myotis_brandtii_TFAM_10031378 Myotis brandtii Myotis_brandtii_TFAM_10031378 N 0.451
MPER_06248 Moniliophthora perniciosa MPER_06248 N 0.450
Myotis_brandtii_TIMM8A_10019481 Myotis brandtii Myotis_brandtii_TIMM8A_10019481 N 0.450
estExt_fgeneshDP_kg.C_1020010 Dictyostelium purpureum estExt_fgeneshDP_kg.C_1020010 N 0.450
EFA85451.1 Polysphondylium pallidum EFA85451.1 N 0.450
DILT_0001419401 Diphyllobothrium latum DILT_0001419401 N 0.450
ENSAMXG00000017231 Astyanax mexicanus ENSAMXG00000017231 I 0.448
ENSAPLG00000010204 Anas platyrhynchos ENSAPLG00000010204 N 0.448
ENSCSAG00000016751 Chlorocebus sabaeus ENSCSAG00000016751 N 0.448
SOX18 Dasypus novemcinctus ENSDNOG00000036237 N 0.448
SOX2 Felis catus ENSFCAG00000029205 I 0.448
ENSMGAG00000006624 Meleagris gallopavo ENSMGAG00000006624 N 0.448
Hmg20b Mus musculus ENSMUSG00000020232 D 0.448
ENSOANG00000011188 Ornithorhynchus anatinus ENSOANG00000011188 I 0.448
SOX2 Procavia capensis ENSPCAG00000003690 I 0.448
SOX18 Procavia capensis ENSPCAG00000015663 N 0.448
SOX18 Pan troglodytes ENSPTRG00000030459 I 0.448
Phyra76615 Phytophthora ramorum Phyra76615 N 0.448
ENSBTAP00000027633-D1 Bos grunniens ENSBTAP00000027633-D1 I 0.448
ALUE_0000245701 Ascaris lumbricoides ALUE_0000245701 N 0.448
ANCDUO_13942 Ancylostoma duodenale ANCDUO_13942 N 0.448
TVAG_114290 Trichomonas vaginalis TVAG_114290 N 0.444
ECPE_0001383301 Echinostoma caproni ECPE_0001383301 N 0.442
K443DRAFT_58201 Laccaria amethystina K443DRAFT_58201 N 0.438
LACBIDRAFT_169971 Laccaria bicolor LACBIDRAFT_169971 N 0.438
ENSNLEG00000002693 Nomascus leucogenys ENSNLEG00000002693 N 0.437
PPA11045 Pristionchus pacificus PPA11045 N 0.437
estExt_fgenesh2_pg.C_390049 Monosiga brevicollis estExt_fgenesh2_pg.C_390049 N 0.437
ENSOANG00000002448 Ornithorhynchus anatinus ENSOANG00000002448 I 0.436
M404DRAFT_787968 Pisolithus tinctorius M404DRAFT_787968 N 0.436
HHAL001583-PA Halyomorpha halys HHAL001583-PA N 0.436
AMEM007694 Anopheles merus AMEM007694 N 0.436
orange1.1g043804m.g Citrus sinensis orange1.1g043804m.g N 0.434
Ca_14341 Cicer arietinum Ca_14341 N 0.432
GLOTRDRAFT_8101 Gloeophyllum trabeum GLOTRDRAFT_8101 N 0.431
PLEOSDRAFT_1017219 Pleurotus ostreatus PLEOSDRAFT_1017219 N 0.431
SCLCIDRAFT_59496 Scleroderma citrinum SCLCIDRAFT_59496 N 0.431
TRAES3BF116200180CFD_g Triticum aestivum TRAES3BF116200180CFD_g N 0.431
UCREL1_237 Eutypa lata UCREL1_237 N 0.429
Afo_R012670 Aptenodytes forsteri Afo_R012670 N 0.429
68433 Aureococcus anophagefferens 68433 N 0.429
GPUH_0000499601 Gongylonema pulchrum GPUH_0000499601 N 0.429
PK00252.1 Cannabis sativa PK00252.1 N 0.428
orange1.1g014153m.g Citrus sinensis orange1.1g014153m.g N 0.427
RPRC001038 Rhodnius prolixus RPRC001038 N 0.426
maker-nMf.1.1.scaf02291-snap-gene-0.16 Meloidogyne floridensis maker-nMf.1.1.scaf02291-snap-gene-0.16 N 0.425
ENSPMAG00000004519 Petromyzon marinus ENSPMAG00000004519 N 0.422
Hsal_05005--XP_001122373.1_APIME Harpegnathos saltator Hsal_05005--XP_001122373.1_APIME N 0.422
Ogr13852 Ophisaurus gracilis Ogr13852 N 0.422
TVAG_468590 Trichomonas vaginalis TVAG_468590 N 0.420
YQE_08562 Dendroctonus ponderosae YQE_08562 N 0.419
AAEL000771 Aedes aegypti AAEL000771 N 0.417
ACEP25851 Atta cephalotes ACEP25851 N 0.417
AGAP028091 Anopheles gambiae AGAP028091 N 0.417
PHUM433280 Pediculus humanus PHUM433280 N 0.417
SINV16572 Solenopsis invicta SINV16572 N 0.417
SPU_021871 Strongylocentrotus purpuratus SPU_021871 N 0.417
TC009856 Tribolium castaneum TC009856 N 0.417
HHAL001293-PA Halyomorpha halys HHAL001293-PA N 0.417
AALB009772 Anopheles albimanus AALB009772 N 0.417
AATE015714 Anopheles atroparvus AATE015714 N 0.417
ACOM026653 Anopheles coluzzii ACOM026653 N 0.417
ACUA012732 Anopheles culicifacies ACUA012732 N 0.417
ADIR009661 Anopheles dirus ADIR009661 N 0.417
AEPI007948 Anopheles epiroticus AEPI007948 N 0.417
AFUN009317 Anopheles funestus AFUN009317 N 0.417
AMAM023617 Anopheles maculatus AMAM023617 N 0.417
AMEC011653 Anopheles melas AMEC011653 N 0.417
AMEM002834 Anopheles merus AMEM002834 N 0.417
AQUA005880 Anopheles quadriannulatus AQUA005880 N 0.417
ASTEI06131 Anopheles stephensi ASTEI06131 N 0.417