CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Phyra76402
(
Phytophthora ramorum
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
Phyra76402
T331989_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Phyra76402
Sox
355
400
GKTRRSASETRKIFGDMWRKCTEEEKEYYGQMTEVENEKRRRDHVM
Links
Other
Sox
family TFs
Other
Phytophthora ramorum
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
estExt_fgenesh1_kg.C_340020
Phytophthora capsici
estExt_fgenesh1_kg.C_340020
N
0.697
CBN25334
Caenorhabditis brenneri
CBN25334
N
0.481
GH17483
Drosophila grimshawi
FBgn0124953
N
0.447
estExt_fgenesh2_pg.C_390049
Monosiga brevicollis
estExt_fgenesh2_pg.C_390049
N
0.446
EMIHUDRAFT_107556
Emiliania huxleyi
EMIHUDRAFT_107556
N
0.421
Thhalv10015680m.g
Eutrema salsugineum
Thhalv10015680m.g
N
0.421
Sakowv30045438m.g
Saccoglossus kowalevskii
Sakowv30045438m.g
N
0.417
GLOINDRAFT_31865
Rhizophagus irregularis
GLOINDRAFT_31865
N
0.416