CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GH17483
(
Drosophila grimshawi
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
FBgn0124953
T329621_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0151389
Sox
69
102
VTACQLSQLRKTALRKWNELPEEQKEKYMRLALN
Links
Other
Sox
family TFs
Other
Drosophila grimshawi
TFs
22 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MELLADRAFT_86211
Melampsora laricipopulina
MELLADRAFT_86211
N
0.478
GPLIN_001054700
Globodera pallida
GPLIN_001054700
N
0.478
TVAG_468590
Trichomonas vaginalis
TVAG_468590
N
0.469
estExt_fgenesh2_pg.C_390049
Monosiga brevicollis
estExt_fgenesh2_pg.C_390049
N
0.468
estExt_fgenesh1_kg.C_340020
Phytophthora capsici
estExt_fgenesh1_kg.C_340020
N
0.464
fgeneshPB_pg.10__1
Phycomyces blakesleeanus
fgeneshPB_pg.10__1
N
0.460
fgeneshPB_pg.46__7
Phycomyces blakesleeanus
fgeneshPB_pg.46__7
N
0.460
CBN25334
Caenorhabditis brenneri
CBN25334
N
0.456
DAPPUDRAFT_336128
Daphnia pulex
DAPPUDRAFT_336128
N
0.456
GA28914
Drosophila pseudoobscura
FBgn0250273
N
0.451
orange1.1g014153m.g
Citrus sinensis
orange1.1g014153m.g
N
0.449
OLONG_013579
Oryza longistaminata
OLONG_013579
N
0.448
Phyra76402
Phytophthora ramorum
Phyra76402
N
0.447
PTTG_03070
Puccinia triticina
PTTG_03070
N
0.446
SBAD_0001127201
Soboliphyme baturini
SBAD_0001127201
N
0.439
SMU15030327
Schmidtea mediterranea
SMU15030327
N
0.437
orange1.1g036321m.g
Citrus sinensis
orange1.1g036321m.g
N
0.435
CGOC_0001370301
Cylicostephanus goldi
CGOC_0001370301
N
0.431
SERLA73DRAFT_158240
Serpula lacrymans
SERLA73DRAFT_158240
N
0.423
EMIHUDRAFT_107556
Emiliania huxleyi
EMIHUDRAFT_107556
N
0.421
fgenesh2_pg.scaffold_535000011
Branchiostoma floridae
fgenesh2_pg.scaffold_535000011
N
0.420
GLOINDRAFT_16424
Rhizophagus irregularis
GLOINDRAFT_16424
N
0.417