TRIUR3_17277 (Triticum urartu)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 TRIUR3_17277 T333056_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
TRIUR3_17277-P1 Sox 1 42

Links

Other Sox family TFs
Other Triticum urartu TFs

42 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Traes_3DL_21C50DDF5 Triticum aestivum Traes_3DL_21C50DDF5 N 0.599
GLYMA20G01570 Glycine max GLYMA20G01570 N 0.568
TVAG_390840 Trichomonas vaginalis TVAG_390840 N 0.512
Gorai.011G042300 Gossypium raimondii Gorai.011G042300 N 0.507
Traes_7BL_F45C15FA2 Triticum aestivum Traes_7BL_F45C15FA2 N 0.491
TRAES3BF116200180CFD_g Triticum aestivum TRAES3BF116200180CFD_g N 0.462
WALSEDRAFT_59420 Wallemia sebi WALSEDRAFT_59420 N 0.462
cassava6450.valid.m1 Manihot esculenta cassava6450.valid.m1 N 0.460
Traes_7AL_364A6E96F Triticum aestivum Traes_7AL_364A6E96F N 0.456
Traes_7DL_0CEFCB39D Triticum aestivum Traes_7DL_0CEFCB39D N 0.456
HelroG167700 Helobdella robusta HelroG167700 N 0.454
PDK_20s1781681g001 Phoenix dactylifera PDK_20s1781681g001 N 0.454
TCNE_0000669501 Toxocara canis TCNE_0000669501 N 0.453
GPLIN_000847800 Globodera pallida GPLIN_000847800 N 0.451
SapurV1A.0237s0190 Salix purpurea SapurV1A.0237s0190 N 0.445
EMIHUDRAFT_251194 Emiliania huxleyi EMIHUDRAFT_251194 N 0.443
yakG000714 Bos grunniens yakG000714 N 0.443
YQE_08562 Dendroctonus ponderosae YQE_08562 N 0.442
L798_05432 Zootermopsis nevadensis L798_05432 N 0.441
Phyra76615 Phytophthora ramorum Phyra76615 N 0.439
L798_00185 Zootermopsis nevadensis L798_00185 N 0.438
Gorai.002G115100 Gossypium raimondii Gorai.002G115100 I 0.436
MDP0000242568 Malus domestica MDP0000242568 I 0.436
orange1.1g031906m.g Citrus sinensis orange1.1g031906m.g I 0.436
EFA85451.1 Polysphondylium pallidum EFA85451.1 N 0.436
ACOM026653 Anopheles coluzzii ACOM026653 N 0.436
AQUA005880 Anopheles quadriannulatus AQUA005880 N 0.436
ASIS001889 Anopheles sinensis ASIS001889 N 0.436
GLOINDRAFT_335861 Rhizophagus irregularis GLOINDRAFT_335861 N 0.434
Myotis_brandtii_Hmgb2_10029741 Myotis brandtii Myotis_brandtii_Hmgb2_10029741 N 0.434
fgenesh_scip_prom.28083.3150 Phytophthora lateralis fgenesh_scip_prom.28083.3150 N 0.433
PK00252.1 Cannabis sativa PK00252.1 N 0.431
DDB_G0287073 Dictyostelium discoideum DDB_G0287073 N 0.428
GLOINDRAFT_31865 Rhizophagus irregularis GLOINDRAFT_31865 N 0.419
WUBG_10398 Wuchereria bancrofti WUBG_10398 N 0.418
EMIHUDRAFT_453575 Emiliania huxleyi EMIHUDRAFT_453575 N 0.416
M404DRAFT_787968 Pisolithus tinctorius M404DRAFT_787968 N 0.416
Myotis_brandtii_TIMM8A_10019481 Myotis brandtii Myotis_brandtii_TIMM8A_10019481 N 0.416
estExt_fgeneshDP_kg.C_1020010 Dictyostelium purpureum estExt_fgeneshDP_kg.C_1020010 N 0.415
F775_05073 Aegilops tauschii F775_05073 I 0.364
MLOC_7069 Hordeum vulgare MLOC_7069 N 0.364
TRAES3BF031900060CFD_g Triticum aestivum TRAES3BF031900060CFD_g I 0.364