TELCIR_15720 (Teladorsagia circumcincta)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 TELCIR_15720 T236891_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
VSX1
M03087_2.00 		Homo sapiens
YTAATTAN
NTAATTAR		 SELEX
Jolma et al.(2013)
VSX1_1 		0.689 0.650
VSX1
M03088_2.00 		Homo sapiens
NNYAATTRRBN
NVYYAATTRNN		 SELEX
Jolma et al.(2013)
VSX1_2 		0.689 0.650
VSX1
M04941_2.00 		Homo sapiens
YYAATTRN
NYAATTRR		 SELEX
Yin et al.(2017)
VSX1_eDBD_HT-SELEX 		0.689 0.650
VSX1
M04944_2.00 		Homo sapiens
NTAATTRS
SYAATTAN		 SELEX
Yin et al.(2017)
VSX1_FL_HT-SELEX 		0.689 0.650
VSX1
M05869_2.00 		Homo sapiens
DGCTAATTAN
NTAATTAGCH		 SMiLE-seq
Isakova et al.(2017)
VSX1 		0.689 0.650
VSX1
M04942_2.00 		Homo sapiens
NTAAYGMN
NKCRTTAN		 SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_1 		0.689 0.650
VSX1
M04943_2.00 		Homo sapiens
YYAATTRN
NYAATTRR		 SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_2 		0.689 0.650
VSX1
M04945_2.00 		Homo sapiens
NTAATTRG
CYAATTAN		 SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_1 		0.689 0.650
VSX1
M04946_2.00 		Homo sapiens
NTAAYGAN
NTCRTTAN		 SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_2 		0.689 0.650
VAX1
M03168_2.00 		Homo sapiens
YTAATKAN
NTMATTAR		 SELEX
Jolma et al.(2013)
VAX1_1 		0.682 0.500
VAX1
M05182_2.00 		Homo sapiens
BTAATTRN
NYAATTAV		 SELEX
Yin et al.(2017)
VAX1_eDBD_HT-SELEX 		0.682 0.500
VAX1
M05183_2.00 		Homo sapiens
BTMATKRN
NYMATKAV		 SELEX
Yin et al.(2017)
VAX1_eDBD_Methyl-HT-SELEX 		0.682 0.500
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
TELCIR_15720 Homeodomain 108 127

Links

Other Homeodomain family TFs
Other Teladorsagia circumcincta TFs

1202 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ATGRP2B Arabidopsis lyrata fgenesh2_kg.4__14__AT2G21060.1 I 0.000
CSP2 Arabidopsis thaliana AT4G38680 I 0.000
CSP4 Arabidopsis thaliana AT2G21060 D 0.000
Bostr.25542s0051 Boechera stricta Bostr.25542s0051 I 0.000
Bo3g141510 Brassica oleracea Bo3g141510 I 0.000
Bo4g145670 Brassica oleracea Bo4g145670 I 0.000
Bo7g049880 Brassica oleracea Bo7g049880 I 0.000
Bo8g102040 Brassica oleracea Bo8g102040 I 0.000
Bra030325 Brassica rapa Bra030325 I 0.000
Bra031159 Brassica rapa Bra031159 I 0.000
Cagra.2961s0009 Capsella grandiflora Cagra.2961s0009 I 0.000
Gorai.002G195100 Gossypium raimondii Gorai.002G195100 I 0.000
Gorai.002G195000 Gossypium raimondii Gorai.002G195000 I 0.000
cassava29163.valid.m1 Manihot esculenta cassava29163.valid.m1 N 0.000
mgf001526m Mimulus guttatus mgf001526m N 0.000
mgf014458m Mimulus guttatus mgf014458m N 0.000
mgf015980m Mimulus guttatus mgf015980m I 0.000
Solyc10g055250.1 Solanum lycopersicum Solyc10g055250.1 I 0.000
PGSC0003DMG400023206 Solanum tuberosum PGSC0003DMG400023206 I 0.000
VIT_03s0038g02130 Vitis vinifera VIT_03s0038g02130 I 0.000