OGLUM04G22060 (Oryza glumaepatula)
HSF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00447 (HSF_DNA-bind) IPR000232 OGLUM04G22060 T241405_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HSFB2B
M06945_2.00 		Arabidopsis thaliana
RGAANNTTCTAGAA
TTCTAGAANNTTCY		 Dap-seq
OMalley et al.(2016)
HSF7_col_a 		0.502 0.816
HSFB2B
M06946_2.00 		Arabidopsis thaliana
RGAANNTTCTAGAA
TTCTAGAANNTTCY		 Dap-seq
OMalley et al.(2016)
HSF7_colamp_a 		0.502 0.816
HSFB2A
M00869_2.00 		Arabidopsis thaliana
NNNNNTTCB
VGAANNNNN		 PBM
Franco-Zorrilla et al.(2014)
HSFB2A 		0.462 0.747
HSFB2A
M06952_2.00 		Arabidopsis thaliana
GAANNTTCYAGA
TCTRGAANNTTC		 Dap-seq
OMalley et al.(2016)
HSF6_col_a 		0.462 0.747
HSFB4
M06936_2.00 		Arabidopsis thaliana
RGAASNTTCTAGAAN
NTTCTAGAANSTTCY		 Dap-seq
OMalley et al.(2016)
HSFB4_col_a 		0.454 0.736
HSFB3
M06937_2.00 		Arabidopsis thaliana
RRAANMWTCTAGAAV
BTTCTAGAWKNTTYY		 Dap-seq
OMalley et al.(2016)
HSFB3_col_a 		0.441 0.690
HSFB3
M06938_2.00 		Arabidopsis thaliana
AABSTTCTAGAAN
NTTCTAGAASVTT		 Dap-seq
OMalley et al.(2016)
HSFB3_colamp_a 		0.441 0.690
HSFA4A
M06947_2.00 		Arabidopsis thaliana
NNNRGAABBTTCTAGAANN
NNTTCTAGAAVVTTCYNNN		 Dap-seq
OMalley et al.(2016)
HSF21_col_a 		0.406 0.632
HSFC1
M00868_2.00 		Arabidopsis thaliana
NDTCBNNN
NNNVGAHN		 PBM
Franco-Zorrilla et al.(2014)
HSFC1 		0.388 0.598
HSFC1
M06943_2.00 		Arabidopsis thaliana
GAASNTTCTAG
CTAGAANSTTC		 Dap-seq
OMalley et al.(2016)
HSFC1_col_a 		0.388 0.598
HSFC1
M06944_2.00 		Arabidopsis thaliana
RGAASNTTCTAGAANVW
WBNTTCTAGAANSTTCY		 Dap-seq
OMalley et al.(2016)
HSFC1_colamp_a 		0.388 0.598
HSFA6B
M06941_2.00 		Arabidopsis thaliana
RGAASNTTCTAGA
TCTAGAANSTTCY		 Dap-seq
OMalley et al.(2016)
HSFA6B_colamp_a 		0.383 0.644
HSFA6B
M06942_2.00 		Arabidopsis thaliana
RGAABNTTCTRGAAN
NTTCYAGAANVTTCY		 Dap-seq
OMalley et al.(2016)
HSFA6B_col 		0.383 0.644
HSFA1E
M06939_2.00 		Arabidopsis thaliana
RGAANNTTCTAGA
TCTAGAANNTTCY		 Dap-seq
OMalley et al.(2016)
HSFA1E_col_a 		0.382 0.632
HSFA1E
M06940_2.00 		Arabidopsis thaliana
RGAASNTTCTAGAAN
NTTCTAGAANSTTCY		 Dap-seq
OMalley et al.(2016)
HSFA1E_colamp_a 		0.382 0.632
HSFA6A
M06950_2.00 		Arabidopsis thaliana
GAASNTTCTAGAANNW
WNNTTCTAGAANSTTC		 Dap-seq
OMalley et al.(2016)
HSFA6A_col_a 		0.380 0.609
HSFA6A
M06951_2.00 		Arabidopsis thaliana
GAASNTTCTAGAA
TTCTAGAANSTTC		 Dap-seq
OMalley et al.(2016)
HSFA6A_colamp_a 		0.380 0.609
HSFA1B
M06948_2.00 		Arabidopsis thaliana
GAANNTTCTAGA
TCTAGAANNTTC		 Dap-seq
OMalley et al.(2016)
HSF3_col_a 		0.361 0.644
HSFA1B
M06949_2.00 		Arabidopsis thaliana
TTCYRG
CYRGAA		 Dap-seq
OMalley et al.(2016)
HSF3_colamp_a 		0.361 0.644
HSF1
M03329_2.00 		Homo sapiens
GAANVTTCBVGAA
TTCBVGAABNTTC		 SELEX
Jolma et al.(2013)
HSF1_1 		0.342 0.529
HSF1
M03330_2.00 		Homo sapiens
GAANRTTCBAGAA
TTCTVGAAYNTTC		 SELEX
Jolma et al.(2013)
HSF1_2 		0.342 0.529
HSF1
M05523_2.00 		Homo sapiens
VGAABVTTCBVGAWN
NWTCBVGAABVTTCB		 SELEX
Yin et al.(2017)
HSF1_eDBD_HT-SELEX 		0.342 0.529
HSF1
M05525_2.00 		Homo sapiens
VGAANRTTCKVGAAN
NTTCBMGAAYNTTCB		 SELEX
Yin et al.(2017)
HSF1_FL_HT-SELEX 		0.342 0.529
HSF1
M07977_2.00 		Homo sapiens
GDCSYGGGTTCRADYCCC
GGGRHTYGAACCCRSGHC		 ChIP-seq
Gerstein et al.(2012)
HepG2_HSF1_Stanford 		0.342 0.529
HSF1
M09230_2.00 		Homo sapiens
NRGAANNTTCYRGAA
TTCYRGAANNTTCYN		 Misc
Kulakovskiy et al.(2013)
HSF1_HUMAN.H11MO.0.A 		0.342 0.529
Hsf1
M09232_2.00 		Mus musculus
NRGAANNTTCYRGAA
TTCYRGAANNTTCYN		 Misc
Kulakovskiy et al.(2013)
HSF1_MOUSE.H11MO.0.A 		0.342 0.529
HSF1
M09592_2.00 		Homo sapiens
NNBBCYRGAANNTTCYRGVV
BBCYRGAANNTTCYRGVVNN		 Misc
Heinz et al.(2010)
HepG2-HSF1_GSE31477 		0.342 0.529
Hsf1
M09593_2.00 		Mus musculus
NRGAANNTTCYRGAA
TTCYRGAANNTTCYN		 Misc
Heinz et al.(2010)
Striatum-HSF1_GSE38000 		0.342 0.529
HSF1
M10863_2.00 		Homo sapiens
NGAAHNTTCY
RGAANDTTCN		 Transfac
Matys et al.(2006)
V$HSF1_01 		0.342 0.529
HSF1
M10864_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HSF1_Q5_01 		0.342 0.529
HSF1
M10865_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HSF1_Q5 		0.342 0.529
HSF1
M10866_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HSF1_Q6_01 		0.342 0.529
HSF1
M10867_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HSF1_Q6 		0.342 0.529
HSF1
M10868_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HSF_Q6 		0.342 0.529
HSF1
M05524_2.00 		Homo sapiens
RGAANRTTCYRGAWN
NWTCYRGAAYNTTCY		 SELEX
Yin et al.(2017)
HSF1_eDBD_Methyl-HT-SELEX 		0.342 0.529
HSF1
M05526_2.00 		Homo sapiens
RGAANVTTCYRGAWN
NWTCYRGAABNTTCY		 SELEX
Yin et al.(2017)
HSF1_FL_Methyl-HT-SELEX 		0.342 0.529
HSF4
M03325_2.00 		Homo sapiens
GAANNTTCBVGAA
TTCBVGAANNTTC		 SELEX
Jolma et al.(2013)
HSF4_1 		0.332 0.517
HSF4
M05509_2.00 		Homo sapiens
VGAABVTTCKVGAAN
NTTCBMGAABVTTCB		 SELEX
Yin et al.(2017)
HSF4_eDBD_HT-SELEX 		0.332 0.517
HSF4
M10862_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HSF4_Q3 		0.332 0.517
HSF4
M05510_2.00 		Homo sapiens
RGAABVWDCYRGAWN
NWTCYRGHWBVTTCY		 SELEX
Yin et al.(2017)
HSF4_eDBD_Methyl-HT-SELEX 		0.332 0.517
For this family, TFs with SR scores > 0.318 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OGLUM04G22060.1 HSF 11 101

Links

Other HSF family TFs
Other Oryza glumaepatula TFs

1519 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACYPI003297 Acyrthosiphon pisum ACYPI003297 I
AAEL008417 Aedes aegypti AAEL008417 N
ALNC14_126360 Albugo laibachii ALNC14_126360 N
AMAG_02504 Allomyces macrogynus AMAG_02504 I
ANCCEY_08672 Ancylostoma ceylanicum ANCCEY_08672 N
ACAC_0000409101 Angiostrongylus cantonensis ACAC_0000409101 N
ACOC_0001323101 Angiostrongylus costaricensis ACOC_0001323101 N
AALB007196 Anopheles albimanus AALB007196 N
AARA009694 Anopheles arabiensis AARA009694 N
AATE006267 Anopheles atroparvus AATE006267 N
ACHR002403 Anopheles christyi ACHR002403 N
ACOM033320 Anopheles coluzzii ACOM033320 N
ACUA003510 Anopheles culicifacies ACUA003510 N
ADAC009894 Anopheles darlingi ADAC009894 N
ADIR002941 Anopheles dirus ADIR002941 N
AEPI008570 Anopheles epiroticus AEPI008570 N
AFAF018499 Anopheles farauti AFAF018499 N
AFUN011346 Anopheles funestus AFUN011346 N
AGAP004110 Anopheles gambiae AGAP004110 N
AMAM021723 Anopheles maculatus AMAM021723 N
AMEC005071 Anopheles melas AMEC005071 N
AMEM002948 Anopheles merus AMEM002948 N
AMIN003838 Anopheles minimus AMIN003838 N
AQUA009805 Anopheles quadriannulatus AQUA009805 N
ASIS023527 Anopheles sinensis ASIS023527 N
ASTEI04275 Anopheles stephensi ASTEI04275 N
GB50764 Apis mellifera GB50764 I
ALUE_0001851001 Ascaris lumbricoides ALUE_0001851001 N
ASU_10445 Ascaris suum ASU_10445 N
ACEP12759 Atta cephalotes ACEP12759 I
BGIBMGA013514 Bombyx mori BGIBMGA013514 N
estExt_fgenesh2_pg.C_1070085 Branchiostoma floridae estExt_fgenesh2_pg.C_1070085 N
estExt_fgenesh2_pm.C_3240002 Branchiostoma floridae estExt_fgenesh2_pm.C_3240002 N
CBN09380 Caenorhabditis brenneri CBN09380 N
Y73E7A.1 Caenorhabditis elegans WBGene00022268 N
CJA05209 Caenorhabditis japonica CJA05209 N
CRE03905 Caenorhabditis remanei CRE03905 N
Cflo_06133--XP_394373.1_APIME Camponotus floridanus Cflo_06133--XP_394373.1_APIME I
CapteG224864 Capitella teleta CapteG224864 I
fgeneshCV_pg.C_scaffold_2000022 Chlorella vulgaris fgeneshCV_pg.C_scaffold_2000022 N
CLEC000086 Cimex lectularius CLEC000086 N
CLEC002888 Cimex lectularius CLEC002888 N
ENSCING00000023833 Ciona intestinalis ENSCING00000023833 N
fgenesh1_pm.2_#_13 Coccomyxa subellipsoidea C169 fgenesh1_pm.2_#_13 N
CGI_10019404 Crassostrea gigas CGI_10019404 N
CMU_009510 Cryptosporidium muris CMU_009510 N
CpipJ_CPIJ005084 Culex pipiens CpipJ_CPIJ005084 N
CPIJ005084 Culex quinquefasciatus CPIJ005084 N
KGM_20190 Danaus plexippus KGM_20190 I
DAPPUDRAFT_303074 Daphnia pulex DAPPUDRAFT_303074 N
DICVIV_03175 Dictyocaulus viviparus DICVIV_03175 N
DILT_0001250601 Diphyllobothrium latum DILT_0001250601 N
GH18160 Drosophila grimshawi FBgn0125628 I
GK13574 Drosophila willistoni FBgn0215582 I
GE25578 Drosophila yakuba FBgn0242642 I
ECPE_0001800901 Echinostoma caproni ECPE_0001800901 N
ETH_00032160 Eimeria tenella ETH_00032160 N
GLYMA04G10125 Glycine max GLYMA04G10125 I
GPUH_0000676401 Gongylonema pulchrum GPUH_0000676401 N
GUITHDRAFT_162866 Guillardia theta GUITHDRAFT_162866 N
HCOI00594600 Haemonchus contortus HCOI00594600 N
HPLM_0000348901 Haemonchus placei HPLM_0000348901 N
HHAL005242-PA Halyomorpha halys HHAL005242-PA I
Hsal_04778--XP_394373.1_APIME Harpegnathos saltator Hsal_04778--XP_394373.1_APIME I
HMEL009197 Heliconius melpomene HMEL009197 N
HPBE_0001252601 Heligmosomoides bakeri HPBE_0001252601 N
HelroG66455 Helobdella robusta HelroG66455 N
ISCW011313 Ixodes scapularis ISCW011313 N
LotgiG126557 Lottia gigantea LotgiG126557 N
LCUP006380 Lucilia cuprina LCUP006380 N
MCINX012524 Melitaea cinxia MCINX012524 I
maker-nMf.1.1.scaf18285-snap-gene-0.4 Meloidogyne floridensis maker-nMf.1.1.scaf18285-snap-gene-0.4 N
MhA1_Contig1250.frz3.gene10 Meloidogyne hapla MhA1_Contig1250.frz3.gene10 N
Minc12734 Meloidogyne incognita Minc12734 N
mgf019496m Mimulus guttatus mgf019496m I
ML11467a Mnemiopsis leidyi ML11467a N
MDOA001488 Musca domestica MDOA001488 I
NV13812 Nasonia vitripennis NV13812 I
NECAME_12352 Necator americanus NECAME_12352 N
NEMVEDRAFT_v1g201358 Nematostella vectensis NEMVEDRAFT_v1g201358 I
NCLIV_051130 Neospora caninum NCLIV_051130 N
NBR_0000605501 Nippostrongylus brasiliensis NBR_0000605501 N
Ocbimv22013575m.g Octopus bimaculoides Ocbimv22013575m.g I
OESDEN_05486 Oesophagostomum dentatum OESDEN_05486 N
T265_00523 Opisthorchis viverrini T265_00523 N
ccdc124 Oryzias latipes ENSORLG00000015728 N
PEQ_0000413701 Parascaris equorum PEQ_0000413701 N
PHUM036320 Pediculus humanus PHUM036320 N
estExt_fgenesh1_kg.C_80399 Phytophthora capsici estExt_fgenesh1_kg.C_80399 N
fgenesh1_pg.C_scaffold_73784000001 Phytophthora capsici fgenesh1_pg.C_scaffold_73784000001 N
fgenesh_scip_prom.46568.2049 Phytophthora kernoviae fgenesh_scip_prom.46568.2049 N
fgenesh_scip_prom.28083.7036 Phytophthora lateralis fgenesh_scip_prom.28083.7036 N
F443_19335 Phytophthora parasitica F443_19335 N
Phyra74523 Phytophthora ramorum Phyra74523 N
Physo132366 Phytophthora sojae Physo132366 N
maker-pir_contig_430-fgenesh-gene-0.3 Pythium irregulare maker-pir_contig_430-fgenesh-gene-0.3 N
maker-piw_contig_1911-snap-gene-0.6 Pythium iwayamai maker-piw_contig_1911-snap-gene-0.6 N
PYU1_G003004 Pythium ultimum PYU1_G003004 N
maker-pve_contig_105-snap-gene-0.29 Pythium vexans maker-pve_contig_105-snap-gene-0.29 N
RPRC009760 Rhodnius prolixus RPRC009760 N
SPRG_06372 Saprolegnia parasitica SPRG_06372 N
A_06553 Schistosoma haematobium A_06553 N
Sjc_0011880 Schistosoma japonicum Sjc_0011880 N
Smp_004360 Schistosoma mansoni Smp_004360 N
SMRZ_0002114501 Schistosoma margrebowiei SMRZ_0002114501 N
SMU15012775 Schmidtea mediterranea SMU15012775 N
SBAD_0000307901 Soboliphyme baturini SBAD_0000307901 N
SINV12391 Solenopsis invicta SINV12391 I
SPPG_05456 Spizellomyces punctatus SPPG_05456 N
SPU_001776 Strongylocentrotus purpuratus SPU_001776 N
TASK_0000467701 Taenia asiatica TASK_0000467701 N
TsM_000545400 Taenia solium TsM_000545400 N
TELCIR_11967 Teladorsagia circumcincta TELCIR_11967 N
tetur18g00680 Tetranychus urticae tetur18g00680 I
TCLT_0001081001 Thelazia callipaeda TCLT_0001081001 N
TGME49_037260 Toxoplasma gondii TGME49_037260 N
TC004658 Tribolium castaneum TC004658 N
D917_07703 Trichinella nativa D917_07703 N
EFV51436 Trichinella spiralis EFV51436 N
TRE_0001918901 Trichobilharzia regenti TRE_0001918901 N
D918_07944 Trichuris suis D918_07944 N
TTRE_0000309701 Trichuris trichiura TTRE_0000309701 N