Tal_R003171 (Tyto alba)
HSF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00447 (HSF_DNA-bind) IPR000232 Tal_R003171 T242664_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HSF2
M03324_2.00 		Homo sapiens
GAANVTTCTAGAA
TTCTAGAABNTTC		 SELEX
Jolma et al.(2013)
HSF2_1 		0.492 0.922
HSF2
M02744_2.00 		Homo sapiens
GAABGTTCTRGA
TCYAGAACVTTC		 SELEX
Jolma et al.(2010)
HSF2_dimertrimer 		0.492 0.922
HSF2
M05505_2.00 		Homo sapiens
VGAABVTTCBVGAWN
NWTCBVGAABVTTCB		 SELEX
Yin et al.(2017)
HSF2_eDBD_HT-SELEX 		0.492 0.922
HSF2
M05507_2.00 		Homo sapiens
VGAANNTTCBVGAAN
NTTCBVGAANNTTCB		 SELEX
Yin et al.(2017)
HSF2_FL_HT-SELEX 		0.492 0.922
HSF2
M09229_2.00 		Homo sapiens
VGAABVTTCKVGAN
NTCBMGAABVTTCB		 Misc
Kulakovskiy et al.(2013)
HSF2_HUMAN.H11MO.0.A 		0.492 0.922
HSF2
M10859_2.00 		Homo sapiens
VGAANNWTCB
VGAWNNTTCB		 Transfac
Matys et al.(2006)
V$HSF2_01 		0.492 0.922
HSF2
M10860_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HSF2_02 		0.492 0.922
HSF2
M10861_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HSF2_Q6 		0.492 0.922
HSF2
M05506_2.00 		Homo sapiens
RGAABVTTCYRGAWN
NWTCYRGAABVTTCY		 SELEX
Yin et al.(2017)
HSF2_eDBD_Methyl-HT-SELEX 		0.492 0.922
HSF2
M05508_2.00 		Homo sapiens
RGAABVTTCYRGAWN
NWTCYRGAABVTTCY		 SELEX
Yin et al.(2017)
HSF2_FL_Methyl-HT-SELEX 		0.492 0.922
Hsf2
M09231_2.00 		Mus musculus
VGAABVTTCKVGAN
NTCBMGAABVTTCB		 Misc
Kulakovskiy et al.(2013)
HSF2_MOUSE.H11MO.0.A 		0.483 0.896
hsf2
M02248_2.00 		Danio rerio
NNNWGTTCTATNN
NNATAGAACWNNN		 PBM
Weirauch et al.(2014)
pTH9010 		0.474 0.857
ANIA_08035
M02247_2.00 		Aspergillus nidulans
NNNNTTCYRN
NYRGAANNNN		 PBM
Weirauch et al.(2014)
pTH8231 		0.343 0.532
hsf-1
M02249_2.00 		Neurospora crassa
NNNTTCBDNN
NNHVGAANNN		 PBM
Weirauch et al.(2014)
pTH8857 		0.332 0.506
For this family, TFs with SR scores > 0.318 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Tal_R003171 HSF 1 80

Links

Other HSF family TFs
Other Tyto alba TFs

232 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
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NAC091 Arabidopsis thaliana AT5G24590 N
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Cagra.21346s0001 Capsella grandiflora Cagra.21346s0001 N
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evm.TU.supercontig_3.170 Carica papaya evm.TU.supercontig_3.170 N
Cla002432 Citrullus lanatus Cla002432 N
Ciclev10019368m.g Citrus clementina Ciclev10019368m.g N
orange1.1g007393m.g Citrus sinensis orange1.1g007393m.g N
Cucsa.273280 Cucumis sativus Cucsa.273280 N
Thhalv10004105m.g Eutrema salsugineum Thhalv10004105m.g N
GLYMA04G40450 Glycine max GLYMA04G40450 N
GLYMA02G38710 Glycine max GLYMA02G38710 N
Gorai.003G073300 Gossypium raimondii Gorai.003G073300 I
Gorai.006G203800 Gossypium raimondii Gorai.006G203800 I
Gorai.004G125900 Gossypium raimondii Gorai.004G125900 I
Lus10015587.g Linum usitatissimum Lus10015587.g I
Lus10032919.g Linum usitatissimum Lus10032919.g I
cassava11768.valid.m1 Manihot esculenta cassava11768.valid.m1 N
MTR_3g093040 Medicago truncatula MTR_3g093040 N
POPTR_0015s00640 Populus trichocarpa POPTR_0015s00640 N
POPTR_0012s00760 Populus trichocarpa POPTR_0012s00760 N
SapurV1A.0285s0090 Salix purpurea SapurV1A.0285s0090 I
SapurV1A.0326s0320 Salix purpurea SapurV1A.0326s0320 N
SapurV1A.0662s0040 Salix purpurea SapurV1A.0662s0040 N
SapurV1A.0666s0060 Salix purpurea SapurV1A.0666s0060 N
SapurV1A.2735s0030 Salix purpurea SapurV1A.2735s0030 N
TCM_015535 Theobroma cacao TCM_015535 I
VIT_16s0098g00760 Vitis vinifera VIT_16s0098g00760 I