IRF6 (Choloepus hoffmanni)
IRF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00605 (IRF) IPR001346 ENSCHOG00000010399 T243965_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Irf6
M00176_2.00 		Mus musculus
NNNHGADASN
NSTHTCDNNN		 PBM
Badis et al.(2009)
Irf6_3803 		1.000 1.000
IRF6
M05527_2.00 		Homo sapiens
RGTWTCGNNNNNNYGAWACY
RGTWTCRNNNNNNCGAWACY		 SELEX
Yin et al.(2017)
IRF6_eDBD_HT-SELEX 		1.000 1.000
IRF6
M05529_2.00 		Homo sapiens
ACCGAAACT
AGTTTCGGT		 SELEX
Yin et al.(2017)
IRF6_FL_HT-SELEX 		1.000 1.000
IRF6
M05528_2.00 		Homo sapiens
RGTWTCGNHNNDNYGAWACY
RGTWTCRNHNNDNCGAWACY		 SELEX
Yin et al.(2017)
IRF6_eDBD_Methyl-HT-SELEX 		1.000 1.000
IRF6
M05530_2.00 		Homo sapiens
ACCGAWACY
RGTWTCGGT		 SELEX
Yin et al.(2017)
IRF6_FL_Methyl-HT-SELEX 		1.000 1.000
IRF6
M02254_2.00 		Meleagris gallopavo
NRNCGAWACY
RGTWTCGNYN		 PBM
Weirauch et al.(2014)
pTH9210 		0.943 0.943
IRF6
M02253_2.00 		Gallus gallus
NNMCNAAWNN
NNWTTNGKNN		 PBM
Weirauch et al.(2014)
pTH9178 		0.933 0.933
irf6.2
M02259_2.00 		Xenopus tropicalis
NVNHGAWACH
DGTWTCDNBN		 PBM
Weirauch et al.(2014)
pTH9302 		0.914 0.914
irf5.L
M02260_2.00 		Xenopus laevis
VNCGADACHN
NDGTHTCGNB		 PBM
Weirauch et al.(2014)
pTH9367 		0.790 0.790
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCHOP00000009207 IRF 9 114

Links

Other IRF family TFs
Other Choloepus hoffmanni TFs

90 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Ca_08043 Cicer arietinum Ca_08043 I
GLYMA15G14320 Glycine max GLYMA15G14320 I
GLYMA09G03390 Glycine max GLYMA09G03390 I
MLOC_34636 Hordeum vulgare MLOC_34636 N
MTR_0095s0040 Medicago truncatula MTR_0095s0040 I
MTR_2g031870 Medicago truncatula MTR_2g031870 I
MTR_8g494240 Medicago truncatula MTR_8g494240 I
mgf004823m Mimulus guttatus mgf004823m I
GSMUA_Achr7G01090_001 Musa acuminata GSMUA_Achr7G01090_001 I
Pavir.J13527 Panicum virgatum Pavir.J13527 N
Pavir.Ib04118 Panicum virgatum Pavir.Ib04118 N
Pavir.Ia01166 Panicum virgatum Pavir.Ia01166 N
Pavir.Eb00490 Panicum virgatum Pavir.Eb00490 N
Si036471m.g Setaria italica Si036471m.g N
Si002375m.g Setaria italica Si002375m.g N
Solyc02g064630.2 Solanum lycopersicum Solyc02g064630.2 I
PGSC0003DMG402003328 Solanum tuberosum PGSC0003DMG402003328 I
Sb03g005080 Sorghum bicolor Sb03g005080 N
Sb01g013670 Sorghum bicolor Sb01g013670 N
VIT_00s1311g00020 Vitis vinifera VIT_00s1311g00020 I
VIT_07s0151g00480 Vitis vinifera VIT_07s0151g00480 I
GRMZM2G163291 Zea mays GRMZM2G163291 N
GRMZM2G095239 Zea mays GRMZM2G095239 N