Irf9 (Rattus norvegicus)
IRF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00605 (IRF) IPR001346 ENSRNOG00000019478 T244370_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Irf9
M00173_2.00 		Mus musculus
NNNRAAANN
NNTTTYNNN		 PBM
Badis et al.(2009)
Isgf3g_2853 		0.971 0.971
Irf9
M09240_2.00 		Mus musculus
GAAABHGAAAYT
ARTTTCDVTTTC		 Misc
Kulakovskiy et al.(2013)
IRF9_MOUSE.H11MO.0.C 		0.971 0.971
IRF9
M02257_2.00 		Ochotona princeps
DNYRAAAVND
HNBTTTYRNH		 PBM
Weirauch et al.(2014)
pTH9337 		0.837 0.837
IRF9
M02258_2.00 		Sus scrofa
WNYGAAASY
RSTTTCRNW		 PBM
Weirauch et al.(2014)
pTH9287 		0.837 0.837
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000026364 IRF 11 115

Links

Other IRF family TFs
Other Rattus norvegicus TFs

46 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_051_00100 Aquilegia coerulea Aquca_051_00100 N 0.000
Aquca_005_00119 Aquilegia coerulea Aquca_005_00119 N 0.000
ATBZIP61 Arabidopsis lyrata fgenesh2_kg.5__2254__AT3G58120.1 N 0.000
ATBZIP34 Arabidopsis lyrata fgenesh2_kg.4__2390__AT2G42380.2 N 0.000
BZIP61 Arabidopsis thaliana AT3G58120 N 0.000
BZIP34 Arabidopsis thaliana AT2G42380 N 0.000
Bostr.18722s0001 Boechera stricta Bostr.18722s0001 N 0.000
Bostr.20903s0063 Boechera stricta Bostr.20903s0063 N 0.000
Bo8g092430 Brassica oleracea Bo8g092430 N 0.000
Bo6g074510 Brassica oleracea Bo6g074510 N 0.000
Bo4g015960 Brassica oleracea Bo4g015960 N 0.000
Bra004689 Brassica rapa Bra004689 N 0.000
Bra007380 Brassica rapa Bra007380 N 0.000
Bra000256 Brassica rapa Bra000256 N 0.000
Bra003320 Brassica rapa Bra003320 N 0.000
PK21227.1 Cannabis sativa PK21227.1 N 0.000
PK16223.1 Cannabis sativa PK16223.1 N 0.000
Cagra.2636s0024 Capsella grandiflora Cagra.2636s0024 N 0.000
Cagra.0686s0029 Capsella grandiflora Cagra.0686s0029 N 0.000
Carubv10023644m.g Capsella rubella Carubv10023644m.g N 0.000
evm.TU.supercontig_209.8 Carica papaya evm.TU.supercontig_209.8 N 0.000
Ca_11292 Cicer arietinum Ca_11292 N 0.000
Ca_02472 Cicer arietinum Ca_02472 N 0.000
Cla015875 Citrullus lanatus Cla015875 N 0.000
Ciclev10008720m.g Citrus clementina Ciclev10008720m.g N 0.000
Ciclev10015966m.g Citrus clementina Ciclev10015966m.g N 0.000
orange1.1g037696m.g Citrus sinensis orange1.1g037696m.g N 0.000
Cucsa.309420 Cucumis sativus Cucsa.309420 N 0.000
Cucsa.148840 Cucumis sativus Cucsa.148840 N 0.000
Cucsa.122790 Cucumis sativus Cucsa.122790 N 0.000
Eucgr.K01085 Eucalyptus grandis Eucgr.K01085 N 0.000
Thhalv10016923m.g Eutrema salsugineum Thhalv10016923m.g N 0.000
Thhalv10006090m.g Eutrema salsugineum Thhalv10006090m.g N 0.000
gene27194-v1.0-hybrid Fragaria vesca gene27194-v1.0-hybrid N 0.000
gene17796-v1.0-hybrid Fragaria vesca gene17796-v1.0-hybrid N 0.000
GLYMA06G43760 Glycine max GLYMA06G43760 N 0.000
GLYMA12G14130 Glycine max GLYMA12G14130 N 0.000
GLYMA12G33600 Glycine max GLYMA12G33600 N 0.000
GLYMA13G34770 Glycine max GLYMA13G34770 N 0.000
GLYMA13G36870 Glycine max GLYMA13G36870 N 0.000
Gorai.013G172500 Gossypium raimondii Gorai.013G172500 N 0.000
Gorai.002G064900 Gossypium raimondii Gorai.002G064900 N 0.000
Lus10033630.g Linum usitatissimum Lus10033630.g N 0.000
Lus10017656.g Linum usitatissimum Lus10017656.g N 0.000
Lus10002185.g Linum usitatissimum Lus10002185.g N 0.000
chr3.CM0160.1080.nc Lotus japonicus chr3.CM0160.1080.nc N 0.000
MDP0000555457 Malus domestica MDP0000555457 N 0.000
MDP0000133698 Malus domestica MDP0000133698 N 0.000
cassava15850.m1 Manihot esculenta cassava15850.m1 N 0.000
MTR_2g090900 Medicago truncatula MTR_2g090900 N 0.000
MTR_4g079500 Medicago truncatula MTR_4g079500 N 0.000
mgf003967m Mimulus guttatus mgf003967m N 0.000
estExt_fgenesh1_pg.C_160081 Physcomitrella patens estExt_fgenesh1_pg.C_160081 N 0.000
POPTR_0013s12810 Populus trichocarpa POPTR_0013s12810 N 0.000
Pm014253 Prunus mume Pm014253 N 0.000
PRUPE_ppa016271mg Prunus persica PRUPE_ppa016271mg N 0.000
PRUPE_ppa022385mg Prunus persica PRUPE_ppa022385mg N 0.000
29646.m001108 Ricinus communis 29646.m001108 N 0.000
SapurV1A.0083s0430 Salix purpurea SapurV1A.0083s0430 N 0.000
SapurV1A.0474s0270 Salix purpurea SapurV1A.0474s0270 N 0.000
SapurV1A.0500s0200 Salix purpurea SapurV1A.0500s0200 N 0.000
SapurV1A.1835s0070 Salix purpurea SapurV1A.1835s0070 N 0.000
SapurV1A.1977s0020 Salix purpurea SapurV1A.1977s0020 N 0.000
Solyc07g062710.2 Solanum lycopersicum Solyc07g062710.2 N 0.000
Solyc12g010800.1 Solanum lycopersicum Solyc12g010800.1 N 0.000
Solyc07g053450.2 Solanum lycopersicum Solyc07g053450.2 N 0.000
PGSC0003DMG401007810 Solanum tuberosum PGSC0003DMG401007810 N 0.000
PGSC0003DMG400009388 Solanum tuberosum PGSC0003DMG400009388 N 0.000
TCM_003607 Theobroma cacao TCM_003607 N 0.000
TCM_031686 Theobroma cacao TCM_031686 N 0.000
VIT_12s0028g02590 Vitis vinifera VIT_12s0028g02590 N 0.000