irf9 (Tetraodon nigroviridis)
IRF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00605 (IRF) IPR001346 ENSTNIG00000008698 T244421_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Irf9
M00173_2.00 		Mus musculus
NNNRAAANN
NNTTTYNNN		 PBM
Badis et al.(2009)
Isgf3g_2853 		0.731 0.731
Irf9
M09240_2.00 		Mus musculus
GAAABHGAAAYT
ARTTTCDVTTTC		 Misc
Kulakovskiy et al.(2013)
IRF9_MOUSE.H11MO.0.C 		0.731 0.731
Irf4
M00175_2.00 		Mus musculus
NNNYGAWASN
NSTWTCRNNN		 PBM
Badis et al.(2009)
Irf4_3476 		0.721 0.721
IRF4
M03334_2.00 		Homo sapiens
HCGAAACCGAAACYW
WRGTTTCGGTTTCGD		 SELEX
Jolma et al.(2013)
IRF4_1 		0.721 0.721
IRF4
M05539_2.00 		Homo sapiens
NYGAAACYGAAACYN
NRGTTTCRGTTTCRN		 SELEX
Yin et al.(2017)
IRF4_FL_HT-SELEX 		0.721 0.721
IRF4
M07978_2.00 		Homo sapiens
DNDVNNGWWVTGAVWVWN
NWBWBTCABWWCNNBHNH		 ChIP-seq
Gerstein et al.(2012)
GM12878_IRF4_HudsonAlpha 		0.721 0.721
IRF4
M09235_2.00 		Homo sapiens
NDWDRRGGAASTGARAVH
DBTYTCASTTCCYYHWHN		 Misc
Kulakovskiy et al.(2013)
IRF4_HUMAN.H11MO.0.A 		0.721 0.721
Irf4
M09243_2.00 		Mus musculus
NDAWVVRGAASTGARAVH
DBTYTCASTTCYBBWTHN		 Misc
Kulakovskiy et al.(2013)
IRF4_MOUSE.H11MO.0.A 		0.721 0.721
IRF4
M09595_2.00 		Homo sapiens
HNYGAAASYD
HRSTTTCRND		 Misc
Heinz et al.(2010)
GM12878-IRF4_GSE32465 		0.721 0.721
IRF4
M10885_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF4_07 		0.721 0.721
IRF4
M10886_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF4_08 		0.721 0.721
IRF4
M10887_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF4_Q5_01 		0.721 0.721
IRF4
M10888_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF4_Q5 		0.721 0.721
IRF4
M10889_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF4_Q6 		0.721 0.721
IRF4
M05540_2.00 		Homo sapiens
NYGAAASYGAWASHN
NDSTWTCRSTTTCRN		 SELEX
Yin et al.(2017)
IRF4_FL_Methyl-HT-SELEX 		0.721 0.721
IRF9
M02258_2.00 		Sus scrofa
WNYGAAASY
RSTTTCRNW		 PBM
Weirauch et al.(2014)
pTH9287 		0.702 0.702
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTNIP00000011548 IRF 11 116

Links

Other IRF family TFs
Other Tetraodon nigroviridis TFs

98 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000016347 Ailuropoda melanoleuca ENSAMEG00000016347 I 0.712
ENSAMEG00000005976 Ailuropoda melanoleuca ENSAMEG00000005976 I 0.721
Alligator_sinensis_CCG015622.1 Alligator sinensis Alligator_sinensis_CCG015622.1 I 0.712
ENSAPLG00000014646 Anas platyrhynchos ENSAPLG00000014646 I 0.712
Afo_R014746 Aptenodytes forsteri Afo_R014746 I 0.712
ENSAMXG00000006093 Astyanax mexicanus ENSAMXG00000006093 I 0.721
ENSAMXG00000016370 Astyanax mexicanus ENSAMXG00000016370 I 0.702
ENSAMXG00000004911 Astyanax mexicanus ENSAMXG00000004911 I 0.769
ENSP00000370343-D1 Bos grunniens ENSP00000370343-D1 I 0.721
IRF4 Bos taurus ENSBTAG00000002929 I 0.721
Brh_R000433 Buceros rhinoceros Brh_R000433 I 0.702
IRF9 Callithrix jacchus ENSCJAG00000007065 I 0.721
IRF4 Callithrix jacchus ENSCJAG00000019524 I 0.721
Aan_R012662 Calypte anna Aan_R012662 I 0.712
IRF9 Canis familiaris ENSCAFG00000012007 I 0.712
IRF9 Cavia porcellus ENSCPOG00000026474 I 0.712
IRF4 Cavia porcellus ENSCPOG00000003562 I 0.721
Cmyd_10011521 Chelonia mydas Cmyd_10011521 I 0.712
ENSCSAG00000016071 Chlorocebus sabaeus ENSCSAG00000016071 I 0.712
ENSCSAG00000007164 Chlorocebus sabaeus ENSCSAG00000007164 I 0.721
irf9 Danio rerio ENSDARG00000016457 I 0.808
irf4b Danio rerio ENSDARG00000055374 I 0.705
Irf4 Dipodomys ordii ENSDORG00000014895 I 0.721
IRF4 Echinops telfairi ENSETEG00000018472 I 0.721
IRF4 Equus caballus ENSECAG00000016808 I 0.721
IRF9 Equus caballus ENSECAG00000024429 I 0.702
IRF9 Felis catus ENSFCAG00000018849 I 0.712
IRF4 Felis catus ENSFCAG00000022941 I 0.721
ENSFALG00000013071 Ficedula albicollis ENSFALG00000013071 I 0.712
ENSGMOG00000002167 Gadus morhua ENSGMOG00000002167 I 0.788
ENSGALG00000012830 Gallus gallus ENSGALG00000012830 I 0.712
irf9 Gasterosteus aculeatus ENSGACG00000001697 I 0.827
Gfo_R003357 Geospiza fortis Gfo_R003357 I 0.712
IRF9 Gorilla gorilla ENSGGOG00000016046 I 0.702
IRF4 Gorilla gorilla ENSGGOG00000012342 I 0.721
IRF9 Homo sapiens ENSG00000213928 D 0.702
IRF4 Homo sapiens ENSG00000137265 D 0.721
ENSSTOG00000023450 Ictidomys tridecemlineatus ENSSTOG00000023450 I 0.712
ENSSTOG00000011470 Ictidomys tridecemlineatus ENSSTOG00000011470 I 0.721
ENSLACG00000005859 Latimeria chalumnae ENSLACG00000005859 I 0.721
ENSLACG00000004633 Latimeria chalumnae ENSLACG00000004633 I 0.760
ENSLOCG00000013008 Lepisosteus oculatus ENSLOCG00000013008 I 0.714
ENSLOCG00000001187 Lepisosteus oculatus ENSLOCG00000001187 I 0.768
IRF9 Loxodonta africana ENSLAFG00000026182 I 0.721
IRF4 Loxodonta africana ENSLAFG00000017235 I 0.721
ENSP00000380073 Macaca fascicularis ENSP00000380073 I 0.702
ENSMMUG00000012474 Macaca mulatta ENSMMUG00000012474 I 0.702
IRF4 Macaca mulatta ENSMMUG00000018513 I 0.721
ENSMEUG00000010784 Macropus eugenii ENSMEUG00000010784 I 0.702
ENSMEUG00000002440 Macropus eugenii ENSMEUG00000002440 I 0.712
IRF4 Monodelphis domestica ENSMODG00000008383 I 0.712
ENSMPUG00000007848 Mustela putorius furo ENSMPUG00000007848 I 0.721
ENSMPUG00000005961 Mustela putorius furo ENSMPUG00000005961 I 0.721
Irf4 Mus musculus ENSMUSG00000021356 D 0.721
Irf9 Mus musculus ENSMUSG00000002325 D 0.731
Myotis_brandtii_IRF9_10003711 Myotis brandtii Myotis_brandtii_IRF9_10003711 I 0.721
IRF4 Myotis lucifugus ENSMLUG00000010058 I 0.721
IRF9 Myotis lucifugus ENSMLUG00000025255 I 0.721
ENSNLEG00000015294 Nomascus leucogenys ENSNLEG00000015294 I 0.702
ENSNLEG00000010631 Nomascus leucogenys ENSNLEG00000010631 I 0.721
IRF4 Ochotona princeps ENSOPRG00000012683 I 0.721
ENSONIG00000006398 Oreochromis niloticus ENSONIG00000006398 I 0.705
ENSONIG00000006624 Oreochromis niloticus ENSONIG00000006624 I 0.865
IRF9 Oryctolagus cuniculus ENSOCUG00000028186 I 0.712
IRF4 Oryctolagus cuniculus ENSOCUG00000009374 I 0.721
irf4a Oryzias latipes ENSORLG00000017242 I 0.702
irf9 Oryzias latipes ENSORLG00000013335 I 0.846
irf4b Oryzias latipes ENSORLG00000012712 I 0.702
IRF9 Otolemur garnettii ENSOGAG00000026670 I 0.731
IRF4 Otolemur garnettii ENSOGAG00000014574 I 0.721
ENSOARG00000003822 Ovis aries ENSOARG00000003822 I 0.721
ENSOARG00000019201 Ovis aries ENSOARG00000019201 I 0.702
IRF4 Pan troglodytes ENSPTRG00000017656 I 0.721
IRF9 Pan troglodytes ENSPTRG00000034494 I 0.702
ENSPSIG00000011619 Pelodiscus sinensis ENSPSIG00000011619 I 0.721
ENSPFOG00000000657 Poecilia formosa ENSPFOG00000000657 I 0.705
ENSPFOG00000021810 Poecilia formosa ENSPFOG00000021810 I 0.837
Pvit_14926 Pogona vitticeps Pvit_14926 I 0.731
ENSPPYG00000005686 Pongo abelii ENSPPYG00000005686 I 0.712
ENSPPYG00000016161 Pongo abelii ENSPPYG00000016161 I 0.721
IRF9 Pteropus vampyrus ENSPVAG00000007716 I 0.721
IRF4 Pteropus vampyrus ENSPVAG00000005078 I 0.721
Irf4 Rattus norvegicus ENSRNOG00000061070 I 0.721
Irf9 Rattus norvegicus ENSRNOG00000019478 I 0.731
ENSSHAG00000001872 Sarcophilus harrisii ENSSHAG00000001872 I 0.721
ENSSHAG00000015592 Sarcophilus harrisii ENSSHAG00000015592 I 0.712
IRF9 Sus scrofa ENSSSCG00000002002 D 0.702
IRF4 Taeniopygia guttata ENSTGUG00000002144 I 0.712
irf9 Takifugu rubripes ENSTRUG00000017722 I 0.865
irf4b Takifugu rubripes ENSTRUG00000002946 I 0.712
ENSTSYG00000007445 Tarsius syrichta ENSTSYG00000007445 I 0.702
irf4b Tetraodon nigroviridis ENSTNIG00000008222 I 0.714
ENSTNIG00000002469 Tetraodon nigroviridis ENSTNIG00000002469 I 1.000
IRF4 Tupaia belangeri ENSTBEG00000012240 I 0.721
IRF9 Tursiops truncatus ENSTTRG00000008624 I 0.706
IRF4 Tursiops truncatus ENSTTRG00000001849 I 0.712
ENSXMAG00000004567 Xiphophorus maculatus ENSXMAG00000004567 I 0.827
ENSXMAG00000006246 Xiphophorus maculatus ENSXMAG00000006246 I 0.705