CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Carubv10015898m.g
(
Capsella rubella
)
LOB
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03195 (DUF260)
IPR004883
Carubv10015898m.g
T246764_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Carubv10015898m
LOB
11
109
SCAACKLLKRRCTPTCIFAPYFRSSDLITFAKVHKVFGASNVSKLLGEVPEEQRQETVNSLAYEAEVRLKDPVYGCIGAIASLQKKMLELQHDLAVART
Links
Other
LOB
family TFs
Other
Capsella rubella
TFs
42 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ATBZIP60
Arabidopsis lyrata
fgenesh2_kg.1__3703__AT1G42990.1
I
BZIP60
Arabidopsis thaliana
AT1G42990
D
Bostr.12302s0013
Boechera stricta
Bostr.12302s0013
I
Bo8g024280
Brassica oleracea
Bo8g024280
I
Cagra.2795s0001
Capsella grandiflora
Cagra.2795s0001
I
Carubv10009864m.g
Capsella rubella
Carubv10009864m.g
I
Ca_20172
Cicer arietinum
Ca_20172
N