OGLUM02G00360 (Oryza glumaepatula)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF10545 (MADF_DNA_bdg) IPR006578 OGLUM02G00360 T249542_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
OS02G0104500
M02271_2.00 		Oryza sativa
NDGTAAWWHN
NDWWTTACHN		 PBM
Weirauch et al.(2014)
pTH8719 		0.971 1.000
OS02G0104500
M02272_2.00 		Oryza sativa
NDGTAAWWHN
NDWWTTACHN		 PBM
Weirauch et al.(2014)
pTH9273 		0.971 1.000
PK15172.1
M01263_2.00 		Cannabis sativa
NNNGTWAHWN
NWDTWACNNN		 PBM
Lambert et al.(2019)
pTH10125 		0.873 0.716
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OGLUM02G00360.1 MADF 543 612

Links

Other MADF family TFs
Other Oryza glumaepatula TFs

71 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BRADI1G48330 Brachypodium distachyon BRADI1G48330 N
MLOC_71770 Hordeum vulgare MLOC_71770 N
LPERR06G03990 Leersia perrieri LPERR06G03990 N
OB06G14080 Oryza brachyantha OB06G14080 N
ORGLA06G0040900 Oryza glaberrima ORGLA06G0040900 N
OGLUM06G04550 Oryza glumaepatula OGLUM06G04550 N
BGIOSGA022379 Oryza indica BGIOSGA022379 N
OMERI06G05540 Oryza meridionalis OMERI06G05540 N
ONIVA06G05620 Oryza nivara ONIVA06G05620 N
OPUNC06G04230 Oryza punctata OPUNC06G04230 N
ORUFI06G04410 Oryza rufipogon ORUFI06G04410 N
OS06G0166200 Oryza sativa OS06G0166200 N
Pavir.Da02143 Panicum virgatum Pavir.Da02143 N
Pavir.J33131 Panicum virgatum Pavir.J33131 N
Si006584m.g Setaria italica Si006584m.g N
Sb10g004570 Sorghum bicolor Sb10g004570 N
GRMZM2G086277 Zea mays GRMZM2G086277 N