TELCIR_18230 (Teladorsagia circumcincta)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF10545 (MADF_DNA_bdg) IPR006578 TELCIR_18230 T252646_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CBG08311
M02267_2.00 		Caenorhabditis briggsae
RCGCGGAM
KTCCGCGY		 PBM
Weirauch et al.(2014)
pTH9393 		0.937 0.671
madf-9
M02277_2.00 		Caenorhabditis elegans
VYGCGGAH
DTCCGCRB		 PBM
Weirauch et al.(2014)
pTH8333 		0.937 0.671
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
TELCIR_18230 MADF 35 110

Links

Other MADF family TFs
Other Teladorsagia circumcincta TFs

20 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PK00855.1 Cannabis sativa PK00855.1 N
Cla022491 Citrullus lanatus Cla022491 N
Cucsa.160570 Cucumis sativus Cucsa.160570 N
Eucgr.F02154 Eucalyptus grandis Eucgr.F02154 N
Pm004406 Prunus mume Pm004406 N
Pm004407 Prunus mume Pm004407 N
PRUPE_ppa002943mg Prunus persica PRUPE_ppa002943mg N
PRUPE_ppa1027142mg Prunus persica PRUPE_ppa1027142mg N
Solyc12g087970.1 Solanum lycopersicum Solyc12g087970.1 N
VIT_18s0001g07620 Vitis vinifera VIT_18s0001g07620 N