CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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BGIOSGA028419
(
Oryza indica
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
BGIOSGA028419
T253020_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
BGIOSGA028419-PA
MADS box
10
57
PIANRKARDVCFSKRRQVVIKKANELSILCGVNVAVAVLSPAGKPFFF
Links
Other
MADS box
family TFs
Other
Oryza indica
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
nAv.1.0.1.g02082
Acanthocheilonema viteae
nAv.1.0.1.g02082
N
ASIM_0001204901
Anisakis simplex
ASIM_0001204901
N
ASU_02713
Ascaris suum
ASU_02713
N
Bm3681
Brugia malayi
Bm3681
N
CBN31083
Caenorhabditis brenneri
CBN31083
N
CBG10736
Caenorhabditis briggsae
CBG10736
N
zag-1
Caenorhabditis elegans
WBGene00006970
N
CJA12606
Caenorhabditis japonica
CJA12606
N
CRE10982
Caenorhabditis remanei
CRE10982
N
YQE_00812
Dendroctonus ponderosae
YQE_00812
N
YQE_02569
Dendroctonus ponderosae
YQE_02569
N
YQE_04155
Dendroctonus ponderosae
YQE_04155
N
DICVIV_05785
Dictyocaulus viviparus
DICVIV_05785
N
nDi.2.2.2.g01416
Dirofilaria immitis
nDi.2.2.2.g01416
N
EVEC_0000655901
Enterobius vermicularis
EVEC_0000655901
N
HCOI00581300
Haemonchus contortus
HCOI00581300
N
HPLM_0000501901
Haemonchus placei
HPLM_0000501901
N
LOAG_17507
Loa loa
LOAG_17507
N
WBGene00241636
Onchocerca volvulus
WBGene00241636
N
PTRK_0001785400
Parastrongyloides trichosuri
PTRK_0001785400
N
nRc.2.0.1.g22459
Romanomermis culicivorax
nRc.2.0.1.g22459
N
SBAD_0000454101
Soboliphyme baturini
SBAD_0000454101
N
L596_g23719
Steinernema carpocapsae
L596_g23719
N
L889_g29456
Steinernema feltiae
L889_g29456
N
L893_g27223
Steinernema glaseri
L893_g27223
N
L898_g6841
Steinernema monticolum
L898_g6841
N
L892_g21703
Steinernema scapterisci
L892_g21703
N
SPAL_0000385600
Strongyloides papillosus
SPAL_0000385600
N
SSTP_0000865200
Strongyloides stercoralis
SSTP_0000865200
N
SVE_1904900
Strongyloides venezuelensis
SVE_1904900
N
SMUV_0000904801
Syphacia muris
SMUV_0000904801
N
D917_10103
Trichinella nativa
D917_10103
N
EFV59106
Trichinella spiralis
EFV59106
N
TMUE_s0010015900
Trichuris muris
TMUE_s0010015900
N
D918_03480
Trichuris suis
D918_03480
N
TTRE_0000009201
Trichuris trichiura
TTRE_0000009201
N