CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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BGIOSGA028419
(
Oryza indica
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
BGIOSGA028419
T253020_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
BGIOSGA028419-PA
MADS box
10
57
PIANRKARDVCFSKRRQVVIKKANELSILCGVNVAVAVLSPAGKPFFF
Links
Other
MADS box
family TFs
Other
Oryza indica
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OLONG_015028
Oryza longistaminata
OLONG_015028
N
1.000
ONIVA04G01430
Oryza nivara
ONIVA04G01430
N
1.000
ORUFI08G11050
Oryza rufipogon
ORUFI08G11050
N
1.000
OPUNC08G17930
Oryza punctata
OPUNC08G17930
N
0.958
LPERR08G08390
Leersia perrieri
LPERR08G08390
N
0.792