CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ONIVA04G01430
(
Oryza nivara
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
ONIVA04G01430
T255245_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ONIVA04G01430.1
MADS box
10
57
PIANRKARDVCFSKRRQVVIKKANELSILCGVNVAVAVLSPAGKPFFF
Links
Other
MADS box
family TFs
Other
Oryza nivara
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA028419
Oryza indica
BGIOSGA028419
N
1.000
OLONG_015028
Oryza longistaminata
OLONG_015028
N
1.000
ORUFI08G11050
Oryza rufipogon
ORUFI08G11050
N
1.000
OPUNC08G17930
Oryza punctata
OPUNC08G17930
N
0.958
LPERR08G08390
Leersia perrieri
LPERR08G08390
N
0.792