Bra015645 (Brassica rapa)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 Bra015645 T253284_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AGL67
M10907_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AT1G77950_01 		0.917 0.917
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra015645.1-P MADS box 10 57

Links

Other MADS box family TFs
Other Brassica rapa TFs

48 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CAGL0L11880g Candida glabrata CAGL0L11880g I 0.000
Ecym_3520 Eremothecium cymbalariae Ecym_3520 I 0.000
KAFR_0A02380 Kazachstania africana KAFR_0A02380 I 0.000
KAFR_0B02550 Kazachstania africana KAFR_0B02550 I 0.000
KNAG_0G01870 Kazachstania naganishii KNAG_0G01870 I 0.000
KNAG_0H03010 Kazachstania naganishii KNAG_0H03010 I 0.000
KLLA0_C17710g Kluyveromyces lactis KLLA0_C17710g I 0.000
KLTH0G14454g Kluyveromyces thermotolerans KLTH0G14454g I 0.000
Kwal_23453 Kluyveromyces waltii Kwal_23453 I 0.000
SAKL0H17842g Lachancea kluyveri SAKL0H17842g I 0.000
LALA0_S07e07030g Lachancea lanzarotensis LALA0_S07e07030g I 0.000
KLTH0G14454g Lachancea thermotolerans KLTH0G14454g I 0.000
NCAS_0B04840 Naumovozyma castellii NCAS_0B04840 I 0.000
NDAI_0B02250 Naumovozyma dairenensis NDAI_0B02250 I 0.000
SU7_0636 Saccharomyces arboricola SU7_0636 I 0.000
SU7_0955 Saccharomyces arboricola SU7_0955 I 0.000
7085_YER169W Saccharomyces bayanus 7085_YER169W I 0.000
4347_Multiple Saccharomyces bayanus 4347_Multiple I 0.000
Scas_Contig681.19 Saccharomyces castellii Scas_Contig681.19 I 0.000
GIS1 Saccharomyces cerevisiae YDR096W D 0.000
RPH1 Saccharomyces cerevisiae YER169W D 0.000
SKUD_141701 Saccharomyces kudriavzevii SKUD_141701 I 0.000
6173_YER169W Saccharomyces mikatae 6173_YER169W I 0.000
3770_YDR096W Saccharomyces mikatae 3770_YDR096W I 0.000
6757_YER169W Saccharomyces paradoxus 6757_YER169W I 0.000
4088_Multiple Saccharomyces paradoxus 4088_Multiple I 0.000
AACERI_AaceriAGR117C Saccharomycetaceae sp ashbya aceri AACERI_AaceriAGR117C I 0.000
TBLA_0F03830 Tetrapisispora blattae TBLA_0F03830 I 0.000
TBLA_0E04220 Tetrapisispora blattae TBLA_0E04220 I 0.000
TPHA_0A01940 Tetrapisispora phaffii TPHA_0A01940 I 0.000
TDEL_0A01300 Torulaspora delbrueckii TDEL_0A01300 I 0.000
Kpol_1032p52 Vanderwaltozyma polyspora Kpol_1032p52 I 0.000
ZBAI_06407 Zygosaccharomyces bailii ZBAI_06407 I 0.000
ZBAI_04846 Zygosaccharomyces bailii ZBAI_04846 I 0.000
ZYRO0B11770g Zygosaccharomyces rouxii ZYRO0B11770g I 0.000