CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TPHA_0A01940
(
Tetrapisispora phaffii
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
TPHA_0A01940
T130489_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
RPH1
M00025_2.00
Saccharomyces cerevisiae
NNHCCCCTAAN
NTTAGGGGDNN
PBM
Badis et al.(2008)
RPH1_4571
0.816
0.911
RPH1
M01531_2.00
Saccharomyces cerevisiae
YNMCCCCTWWWW
WWWWAGGGGKNR
PBM
Zhu et al.(2009)
Rph1
0.816
0.911
RPH1
M07455_2.00
Saccharomyces cerevisiae
NCCCCTWA
TWAGGGGN
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0372.1
0.816
0.911
RPH1
M08522_2.00
Saccharomyces cerevisiae
NCCCCTWA
TWAGGGGN
Misc
DeBoer et al.(2011)
YER169W_547
0.816
0.911
GIS1
M00019_2.00
Saccharomyces cerevisiae
NCCCCTWDNN
NNHWAGGGGN
PBM
Badis et al.(2008)
GIS1_4481
0.810
0.911
GIS1
M07449_2.00
Saccharomyces cerevisiae
HCCCCTWDN
NHWAGGGGD
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0306.1
0.810
0.911
GIS1
M08515_2.00
Saccharomyces cerevisiae
HCCCCTWDN
NHWAGGGGD
Misc
DeBoer et al.(2011)
YDR096W_562
0.810
0.911
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CCE61277
C2H2 ZF
777
800
YICQDCKRQFSSGHHLTRHKKSVH
CCE61277
C2H2 ZF
806
827
HSCPKCGKRFKRRDHVLQHLNK
Links
Other
C2H2 ZF
family TFs
Other
Tetrapisispora phaffii
TFs
34 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
KNAG_0H03010
Kazachstania naganishii
KNAG_0H03010
I
0.822
Ecym_3520
Eremothecium cymbalariae
Ecym_3520
I
0.821
KAFR_0B02550
Kazachstania africana
KAFR_0B02550
I
0.821
Kpol_1032p52
Vanderwaltozyma polyspora
Kpol_1032p52
I
0.821
TDEL_0A01300
Torulaspora delbrueckii
TDEL_0A01300
I
0.821
RPH1
Saccharomyces cerevisiae
YER169W
D
0.816
6757_YER169W
Saccharomyces paradoxus
6757_YER169W
I
0.816
SKUD_141701
Saccharomyces kudriavzevii
SKUD_141701
I
0.810
SU7_0636
Saccharomyces arboricola
SU7_0636
I
0.810
GIS1
Saccharomyces cerevisiae
YDR096W
D
0.810
3770_YDR096W
Saccharomyces mikatae
3770_YDR096W
I
0.810
4088_Multiple
Saccharomyces paradoxus
4088_Multiple
I
0.810
4347_Multiple
Saccharomyces bayanus
4347_Multiple
I
0.810
AACERI_AaceriAGR117C
Saccharomycetaceae sp ashbya aceri
AACERI_AaceriAGR117C
I
0.797
AGOS_AGR117C
Ashbya gossypii
AGOS_AGR117C
I
0.797
CAGL0L11880g
Candida glabrata
CAGL0L11880g
I
0.797
KLLA0_C17710g
Kluyveromyces lactis
KLLA0_C17710g
I
0.797
KLTH0G14454g
Lachancea thermotolerans
KLTH0G14454g
I
0.797
KNAG_0G01870
Kazachstania naganishii
KNAG_0G01870
I
0.797
LALA0_S07e07030g
Lachancea lanzarotensis
LALA0_S07e07030g
I
0.797
TBLA_0F03830
Tetrapisispora blattae
TBLA_0F03830
I
0.797
ZBAI_04846
Zygosaccharomyces bailii
ZBAI_04846
I
0.797
ZBAI_06407
Zygosaccharomyces bailii
ZBAI_06407
I
0.797
ZYRO0B11770g
Zygosaccharomyces rouxii
ZYRO0B11770g
I
0.797
KLTH0G14454g
Kluyveromyces thermotolerans
KLTH0G14454g
I
0.797
Kwal_23453
Kluyveromyces waltii
Kwal_23453
I
0.797
SAKL0H17842g
Lachancea kluyveri
SAKL0H17842g
I
0.797
NCAS_0B04840
Naumovozyma castellii
NCAS_0B04840
I
0.792
NDAI_0B02250
Naumovozyma dairenensis
NDAI_0B02250
I
0.792
SU7_0955
Saccharomyces arboricola
SU7_0955
I
0.792
Scas_Contig681.19
Saccharomyces castellii
Scas_Contig681.19
I
0.792
6173_YER169W
Saccharomyces mikatae
6173_YER169W
I
0.792
7085_YER169W
Saccharomyces bayanus
7085_YER169W
I
0.792
KAFR_0A02380
Kazachstania africana
KAFR_0A02380
I
0.773