CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bra024521
(
Brassica rapa
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
Bra024521
T253317_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bra024521.1-P
MADS box
10
54
LISDNATRRVTFRKRKHGLLKKLNELTILCGLRACAIIYSDYEEG
Links
Other
MADS box
family TFs
Other
Brassica rapa
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Ca_08043
Cicer arietinum
Ca_08043
I
GLYMA15G14320
Glycine max
GLYMA15G14320
I
GLYMA09G03390
Glycine max
GLYMA09G03390
I
MLOC_34636
Hordeum vulgare
MLOC_34636
N
MTR_0095s0040
Medicago truncatula
MTR_0095s0040
I
MTR_2g031870
Medicago truncatula
MTR_2g031870
I
MTR_8g494240
Medicago truncatula
MTR_8g494240
I
mgf004823m
Mimulus guttatus
mgf004823m
I
GSMUA_Achr7G01090_001
Musa acuminata
GSMUA_Achr7G01090_001
I
Pavir.J13527
Panicum virgatum
Pavir.J13527
N
Pavir.Ib04118
Panicum virgatum
Pavir.Ib04118
N
Pavir.Ia01166
Panicum virgatum
Pavir.Ia01166
N
Pavir.Eb00490
Panicum virgatum
Pavir.Eb00490
N
Si036471m.g
Setaria italica
Si036471m.g
N
Si002375m.g
Setaria italica
Si002375m.g
N
Solyc02g064630.2
Solanum lycopersicum
Solyc02g064630.2
I
PGSC0003DMG402003328
Solanum tuberosum
PGSC0003DMG402003328
I
Sb03g005080
Sorghum bicolor
Sb03g005080
N
Sb01g013670
Sorghum bicolor
Sb01g013670
N
VIT_00s1311g00020
Vitis vinifera
VIT_00s1311g00020
I
VIT_07s0151g00480
Vitis vinifera
VIT_07s0151g00480
I
GRMZM2G163291
Zea mays
GRMZM2G163291
N
GRMZM2G095239
Zea mays
GRMZM2G095239
N