CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MTR_1g090783
(
Medicago truncatula
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
MTR_1g090783
T254715_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
KEH43337
MADS box
9
57
FISNGAARKATYNKRKKGIIKKVSELSTLCGVSACAIISNPFNSQIEVW
Links
Other
MADS box
family TFs
Other
Medicago truncatula
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
evm.TU.contig_40008
Carica papaya
evm.TU.contig_40008
I
0.724
Ca_08369
Cicer arietinum
Ca_08369
N
0.708
Ciclev10006519m.g
Citrus clementina
Ciclev10006519m.g
I
0.729
Ciclev10013728m.g
Citrus clementina
Ciclev10013728m.g
I
0.729
MDP0000846004
Malus domestica
MDP0000846004
I
0.750
cassava19828.m1
Manihot esculenta
cassava19828.m1
I
0.729
MTR_1g077300
Medicago truncatula
MTR_1g077300
N
0.708
MTR_1g084950
Medicago truncatula
MTR_1g084950
N
0.792
MTR_4g028720
Medicago truncatula
MTR_4g028720
N
0.708
MTR_5g047580
Medicago truncatula
MTR_5g047580
N
0.792
POPTR_0005s00420
Populus trichocarpa
POPTR_0005s00420
I
0.708
30199.m000879
Ricinus communis
30199.m000879
I
0.708