OBART08G15340 (Oryza barthii)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 OBART08G15340 T254998_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
OBART08G15340.1 MADS box 6 51

Links

Other MADS box family TFs
Other Oryza barthii TFs

12 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_12743 Aegilops tauschii F775_12743 N 0.000
BRADI2G49250 Brachypodium distachyon BRADI2G49250 N 0.000
Bo7g117320 Brassica oleracea Bo7g117320 I 0.000
Cagra.2350s0072 Capsella grandiflora Cagra.2350s0072 I 0.000
evm.TU.supercontig_249.7 Carica papaya evm.TU.supercontig_249.7 I 0.000
Ca_05641 Cicer arietinum Ca_05641 I 0.000
Eucgr.F02262 Eucalyptus grandis Eucgr.F02262 I 0.000
GLYMA10G40400 Glycine max GLYMA10G40400 I 0.000
MLOC_51405 Hordeum vulgare MLOC_51405 I 0.000
LPERR03G19190 Leersia perrieri LPERR03G19190 N 0.000
LPERR03G21480 Leersia perrieri LPERR03G21480 I 0.000
GSMUA_Achr7G20260_001 Musa acuminata GSMUA_Achr7G20260_001 N 0.000
GSMUA_Achr6G34890_001 Musa acuminata GSMUA_Achr6G34890_001 I 0.000
GSMUA_Achr10G31400_001 Musa acuminata GSMUA_Achr10G31400_001 N 0.000
OBART03G22560 Oryza barthii OBART03G22560 N 0.000
OBART03G22570 Oryza barthii OBART03G22570 I 0.000
OB03G31780 Oryza brachyantha OB03G31780 I 0.000
OB03G31790 Oryza brachyantha OB03G31790 N 0.000
ORGLA03G0210300 Oryza glaberrima ORGLA03G0210300 I 0.000
ORGLA03G0210200 Oryza glaberrima ORGLA03G0210200 N 0.000
OGLUM03G23340 Oryza glumaepatula OGLUM03G23340 N 0.000
OGLUM03G23350 Oryza glumaepatula OGLUM03G23350 I 0.000
BGIOSGA010468 Oryza indica BGIOSGA010468 I 0.000
BGIOSGA010470 Oryza indica BGIOSGA010470 N 0.000
BGIOSGA010469 Oryza indica BGIOSGA010469 N 0.000
OLONG_027628 Oryza longistaminata OLONG_027628 I 0.000
OPUNC03G21190 Oryza punctata OPUNC03G21190 N 0.000
OPUNC12G15600 Oryza punctata OPUNC12G15600 I 0.000
ORUFI03G23240 Oryza rufipogon ORUFI03G23240 I 0.000
ORUFI03G23230 Oryza rufipogon ORUFI03G23230 N 0.000
OS03G0437100 Oryza sativa OS03G0437100 N 0.000
OS03G0437200 Oryza sativa OS03G0437200 I 0.000
OS12G0583700 Oryza sativa OS12G0583700 I 0.000
PDK_20s1446781g002 Phoenix dactylifera PDK_20s1446781g002 N 0.000
gw1.254.15.1 Physcomitrella patens gw1.254.15.1 I 0.000
Si037343m.g Setaria italica Si037343m.g N 0.000
Si037516m.g Setaria italica Si037516m.g N 0.000
Sb01g031920 Sorghum bicolor Sb01g031920 N 0.000
Traes_2BS_494F02775 Triticum aestivum Traes_2BS_494F02775 N 0.000
Traes_2DS_11ADF414D Triticum aestivum Traes_2DS_11ADF414D N 0.000
Traes_4BS_FE945D2FC Triticum aestivum Traes_4BS_FE945D2FC I 0.000
GRMZM5G883760 Zea mays GRMZM5G883760 N 0.000