ONIVA12G01620 (Oryza nivara)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 ONIVA12G01620 T255280_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
ONIVA12G01620.1 MADS box 13 60

Links

Other MADS box family TFs
Other Oryza nivara TFs

19 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
OBART12G09450 Oryza barthii OBART12G09450 N 0.833
OBART12G09480 Oryza barthii OBART12G09480 N 1.000
ORGLA12G0089800 Oryza glaberrima ORGLA12G0089800 N 1.000
ORGLA12G0089600 Oryza glaberrima ORGLA12G0089600 N 0.833
OGLUM12G10670 Oryza glumaepatula OGLUM12G10670 N 1.000
OGLUM12G10680 Oryza glumaepatula OGLUM12G10680 N 0.833
BGIOSGA018453 Oryza indica BGIOSGA018453 N 0.833
BGIOSGA036334 Oryza indica BGIOSGA036334 N 0.938
BGIOSGA006672 Oryza indica BGIOSGA006672 N 0.833
OLONG_012662 Oryza longistaminata OLONG_012662 N 0.938
OLONG_012664 Oryza longistaminata OLONG_012664 N 0.792
OMERI06G17180 Oryza meridionalis OMERI06G17180 N 0.708
ONIVA12G01580 Oryza nivara ONIVA12G01580 N 0.833
OPUNC12G08600 Oryza punctata OPUNC12G08600 N 0.875
OPUNC12G08610 Oryza punctata OPUNC12G08610 N 0.771
OPUNC06G14680 Oryza punctata OPUNC06G14680 N 0.729
ORUFI12G10490 Oryza rufipogon ORUFI12G10490 N 0.833
ORUFI12G10530 Oryza rufipogon ORUFI12G10530 N 1.000
OS12G0407000 Oryza sativa OS12G0407000 N 0.833