evm.TU.supercontig_109.51 (Carica papaya)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 evm.TU.supercontig_109.51 T258151_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
evm.model.supercontig_109.51 MADS box 15 36

Links

Other MADS box family TFs
Other Carica papaya TFs

23 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Al_scaffold_0001_74 Arabidopsis lyrata Al_scaffold_0001_74 N 0.727
AGL23 Arabidopsis thaliana AT1G65360 N 0.727
AT4G36590 Arabidopsis thaliana AT4G36590 N 0.727
Bostr.26833s0197 Boechera stricta Bostr.26833s0197 N 0.727
Cagra.2519s0016 Capsella grandiflora Cagra.2519s0016 N 0.727
Carubv10028580m.g Capsella rubella Carubv10028580m.g N 0.727
evm.TU.contig_35157.1 Carica papaya evm.TU.contig_35157.1 N 0.773
evm.TU.contig_28241.1 Carica papaya evm.TU.contig_28241.1 N 0.773
evm.TU.supercontig_106.18 Carica papaya evm.TU.supercontig_106.18 N 0.818
evm.TU.supercontig_106.19 Carica papaya evm.TU.supercontig_106.19 N 0.818
evm.TU.supercontig_695.5 Carica papaya evm.TU.supercontig_695.5 N 0.818
evm.TU.supercontig_758.1 Carica papaya evm.TU.supercontig_758.1 N 0.727
Ca_04662 Cicer arietinum Ca_04662 N 0.727
Ca_04660 Cicer arietinum Ca_04660 N 0.727
Ca_04659 Cicer arietinum Ca_04659 N 0.727
MDP0000233925 Malus domestica MDP0000233925 N 0.727
MDP0000278770 Malus domestica MDP0000278770 N 0.727
cassava33542.m1 Manihot esculenta cassava33542.m1 N 0.727
MTR_5g055100 Medicago truncatula MTR_5g055100 N 0.727
Pm021071 Prunus mume Pm021071 N 0.727
PRUPE_ppa026127mg Prunus persica PRUPE_ppa026127mg N 0.727
Solyc01g106730.1 Solanum lycopersicum Solyc01g106730.1 N 0.727
VIT_01s0010g01530 Vitis vinifera VIT_01s0010g01530 N 0.727