CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gorai.013G210700
(
Gossypium raimondii
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00319 (SRF-TF)
IPR002100
Gorai.013G210700
T258512_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gorai.013G210700.1
MADS box
10
56
YITNDTKRKTTCKKRTKGLLKKVRELTTLCKIEACAIILSPDFDSQP
Links
Other
MADS box
family TFs
Other
Gossypium raimondii
TFs
20 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ANCCAN_08211
Ancylostoma caninum
ANCCAN_08211
I
0.000
ACAC_0000449001
Angiostrongylus cantonensis
ACAC_0000449001
I
0.000
ACOC_0001074701
Angiostrongylus costaricensis
ACOC_0001074701
I
0.000
ASU_07400
Ascaris suum
ASU_07400
I
0.000
Bm7610
Brugia malayi
Bm7610
N
0.000
Bm3734
Brugia malayi
Bm3734
I
0.000
BXY_0327500
Bursaphelenchus xylophilus
BXY_0327500
I
0.000
CBG00123
Caenorhabditis briggsae
CBG00123
I
0.000
odr-7
Caenorhabditis elegans
WBGene00003854
D
0.000
CRE14738
Caenorhabditis remanei
CRE14738
I
0.000
DICVIV_10361
Dictyocaulus viviparus
DICVIV_10361
I
0.000
nDi.2.2.2.g08322
Dirofilaria immitis
nDi.2.2.2.g08322
I
0.000
GPLIN_000471400
Globodera pallida
GPLIN_000471400
N
0.000
HPLM_0000729201
Haemonchus placei
HPLM_0000729201
I
0.000
HPBE_0000822201
Heligmosomoides bakeri
HPBE_0000822201
I
0.000
LOAG_12992
Loa loa
LOAG_12992
I
0.000
Minc08762
Meloidogyne incognita
Minc08762
N
0.000
Minc11758
Meloidogyne incognita
Minc11758
N
0.000
OESDEN_00181
Oesophagostomum dentatum
OESDEN_00181
I
0.000
nOo.2.0.1.g08993
Onchocerca ochengi
nOo.2.0.1.g08993
I
0.000
WBGene00238790
Onchocerca volvulus
WBGene00238790
I
0.000
L596_g18571
Steinernema carpocapsae
L596_g18571
I
0.000
L893_g9511
Steinernema glaseri
L893_g9511
I
0.000
L898_g1167
Steinernema monticolum
L898_g1167
I
0.000
L892_g8133
Steinernema scapterisci
L892_g8133
I
0.000
SPAL_0001051900
Strongyloides papillosus
SPAL_0001051900
I
0.000
SSTP_0000225800
Strongyloides stercoralis
SSTP_0000225800
I
0.000
SVE_1772700
Strongyloides venezuelensis
SVE_1772700
I
0.000
SMUV_0000837101
Syphacia muris
SMUV_0000837101
I
0.000
TCLT_0001044101
Thelazia callipaeda
TCLT_0001044101
I
0.000