CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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T265_07052
(
Opisthorchis viverrini
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00319 (SRF-TF)
IPR002100
T265_07052
T259657_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
T265_07052
MADS box
172
219
FIRERARRHSTFSKRKTGMMKKAVELAELTGAEVLLLIASETNHVYAY
Links
Other
MADS box
family TFs
Other
Opisthorchis viverrini
TFs
22 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
csin112160
Clonorchis sinensis
csin112160
N
1.000
ECANG7_07506
Echinococcus canadensis
ECANG7_07506
I
0.792
EmuJ_000377500
Echinococcus multilocularis
EmuJ_000377500
I
0.792
ECPE_0001369301
Echinostoma caproni
ECPE_0001369301
I
0.792
TTAC_0000870401
Hydatigera taeniaeformis
TTAC_0000870401
I
0.792
HDID_0000576901
Hymenolepis diminuta
HDID_0000576901
I
0.812
HmN_000858800
Hymenolepis microstoma
HmN_000858800
I
0.812
HNAJ_0000775201
Hymenolepis nana
HNAJ_0000775201
I
0.812
MCOS_0000609801
Mesocestoides corti
MCOS_0000609801
I
0.792
SSLN_0001407901
Schistocephalus solidus
SSLN_0001407901
N
0.708
SCUD_0000460501
Schistosoma curassoni
SCUD_0000460501
I
0.812
A_01192
Schistosoma haematobium
A_01192
I
0.812
Sjc_0026780
Schistosoma japonicum
Sjc_0026780
I
0.812
Smp_097730
Schistosoma mansoni
Smp_097730
I
0.812
SMRZ_0002507801
Schistosoma margrebowiei
SMRZ_0002507801
I
0.812
SMTD_0001950801
Schistosoma mattheei
SMTD_0001950801
I
0.812
SROB_0002013401
Schistosoma rodhaini
SROB_0002013401
I
0.812
SMU15039528
Schmidtea mediterranea
SMU15039528
N
0.792
SPER_0002407601
Spirometra erinaceieuropaei
SPER_0002407601
N
0.708
SPER_0003232401
Spirometra erinaceieuropaei
SPER_0003232401
N
0.708
TASK_0000457101
Taenia asiatica
TASK_0000457101
I
0.792
TsM_000925700
Taenia solium
TsM_000925700
I
0.792