Cla016961 (Citrullus lanatus)
MBD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01429 (MBD) IPR001739 Cla016961 T261251_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cla016961 MBD 12 112

Links

Other MBD family TFs
Other Citrullus lanatus TFs

26 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00004p00169140 Amborella trichopoda AMTR_s00004p00169140 N 0.712
BRADI4G21540 Brachypodium distachyon BRADI4G21540 N 0.712
PK04144.1 Cannabis sativa PK04144.1 N 0.726
Ca_06682 Cicer arietinum Ca_06682 N 0.726
orange1.1g022412m.g Citrus sinensis orange1.1g022412m.g N 0.730
Cucsa.132180 Cucumis sativus Cucsa.132180 N 0.973
gene31058-v1.0-hybrid Fragaria vesca gene31058-v1.0-hybrid N 0.767
gene15686-v1.0-hybrid Fragaria vesca gene15686-v1.0-hybrid N 0.726
GLYMA04G23780 Glycine max GLYMA04G23780 N 0.712
GLYMA04G23980 Glycine max GLYMA04G23980 N 0.712
GLYMA06G25310 Glycine max GLYMA06G25310 N 0.712
GLYMA06G30590 Glycine max GLYMA06G30590 N 0.712
Lus10019406.g Linum usitatissimum Lus10019406.g N 0.710
chr4.CM0234.40.nc Lotus japonicus chr4.CM0234.40.nc N 0.740
MDP0000152128 Malus domestica MDP0000152128 N 0.726
MDP0000375866 Malus domestica MDP0000375866 N 0.726
MDP0000574053 Malus domestica MDP0000574053 N 0.726
cassava13513.valid.m1 Manihot esculenta cassava13513.valid.m1 N 0.730
cassava13512.valid.m1 Manihot esculenta cassava13512.valid.m1 N 0.730
Pm027560 Prunus mume Pm027560 N 0.726
PRUPE_ppa008789mg Prunus persica PRUPE_ppa008789mg N 0.740
SapurV1A.0034s0480 Salix purpurea SapurV1A.0034s0480 N 0.712
SapurV1A.1100s0070 Salix purpurea SapurV1A.1100s0070 N 0.712
PGSC0003DMG400028533 Solanum tuberosum PGSC0003DMG400028533 N 0.712
TCM_038107 Theobroma cacao TCM_038107 N 0.703
VIT_11s0016g05580 Vitis vinifera VIT_11s0016g05580 N 0.795