RO3G_03369 (Rhizopus oryzae)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 RO3G_03369 T265730_2.00 Broad (2016-May-1)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CDC5
M02698_2.00 		Arabidopsis thaliana
NVCGCTGAGBN
NVCTCAGCGBN		 SELEX
Mathelier et al.(2014)
MA0579.1 		0.796 0.880
CDC5
M11037_2.00 		Arabidopsis thaliana
NVCGCTGAGBN
NVCTCAGCGBN		 Transfac
Matys et al.(2006)
P$CDC5_01 		0.796 0.880
CDC5L
M11049_2.00 		Homo sapiens
GWKTTAAYRTAD
HTAYRTTAAMWC		 Transfac
Matys et al.(2006)
V$CDC5_01 		0.755 0.826
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
RO3T_03368 Myb 7 53
RO3T_03368 Myb 59 103

Links

Other Myb/SANT family TFs
Other Rhizopus oryzae TFs

541 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00040p00057740 Amborella trichopoda AMTR_s00040p00057740 I
Aquca_023_00151 Aquilegia coerulea Aquca_023_00151 I
scaffold_105455.1 Arabidopsis lyrata scaffold_105455.1 N
fgenesh2_kg.8__404__AT5G44080.1 Arabidopsis lyrata fgenesh2_kg.8__404__AT5G44080.1 N
fgenesh2_kg.1__328__AT1G03970.1 Arabidopsis lyrata fgenesh2_kg.1__328__AT1G03970.1 N
Al_scaffold_0007_1421 Arabidopsis lyrata Al_scaffold_0007_1421 N
AT5G44080 Arabidopsis thaliana AT5G44080 N
GBF4 Arabidopsis thaliana AT1G03970 N
Bostr.26675s0358 Boechera stricta Bostr.26675s0358 N
Bostr.3148s0051 Boechera stricta Bostr.3148s0051 N
Bo5g004230 Brassica oleracea Bo5g004230 N
Bo7g067030 Brassica oleracea Bo7g067030 N
Bra015281 Brassica rapa Bra015281 N
PK16522.1 Cannabis sativa PK16522.1 N
Cagra.12696s0002 Capsella grandiflora Cagra.12696s0002 N
Cagra.1671s0014 Capsella grandiflora Cagra.1671s0014 N
Carubv10011573m.g Capsella rubella Carubv10011573m.g N
Carubv10027647m.g Capsella rubella Carubv10027647m.g N
evm.TU.supercontig_21.207 Carica papaya evm.TU.supercontig_21.207 N
Ca_04375 Cicer arietinum Ca_04375 N
Cla014026 Citrullus lanatus Cla014026 N
Ciclev10002059m.g Citrus clementina Ciclev10002059m.g I
Ciclev10002029m.g Citrus clementina Ciclev10002029m.g I
orange1.1g025985m.g Citrus sinensis orange1.1g025985m.g I
Cucsa.363740 Cucumis sativus Cucsa.363740 I
Thhalv10003246m.g Eutrema salsugineum Thhalv10003246m.g N
gene11837-v1.0-hybrid Fragaria vesca gene11837-v1.0-hybrid N
gene08154-v1.0-hybrid Fragaria vesca gene08154-v1.0-hybrid N
GLYMA05G25200 Glycine max GLYMA05G25200 I
GLYMA08G08220 Glycine max GLYMA08G08220 N
GLYMA10G36820 Glycine max GLYMA10G36820 N
Gorai.009G275700 Gossypium raimondii Gorai.009G275700 I
Gorai.002G207000 Gossypium raimondii Gorai.002G207000 I
Gorai.005G078500 Gossypium raimondii Gorai.005G078500 N
Gorai.005G259700 Gossypium raimondii Gorai.005G259700 I
LPERR01G32620 Leersia perrieri LPERR01G32620 I
Lus10022720.g Linum usitatissimum Lus10022720.g I
Lus10028575.g Linum usitatissimum Lus10028575.g N
Lus10014194.g Linum usitatissimum Lus10014194.g I
chr5.CM0052.120.nc Lotus japonicus chr5.CM0052.120.nc N
MDP0000706379 Malus domestica MDP0000706379 I
MDP0000208334 Malus domestica MDP0000208334 N
cassava12750.valid.m1 Manihot esculenta cassava12750.valid.m1 I
MTR_1g098590 Medicago truncatula MTR_1g098590 N
MTR_4g094390 Medicago truncatula MTR_4g094390 I
mgf008848m Mimulus guttatus mgf008848m N
mgf009464m Mimulus guttatus mgf009464m N
mgf015540m Mimulus guttatus mgf015540m I
GSMUA_Achr10G10440_001 Musa acuminata GSMUA_Achr10G10440_001 I
GSMUA_Achr3G22470_001 Musa acuminata GSMUA_Achr3G22470_001 I
GSMUA_Achr9G08900_001 Musa acuminata GSMUA_Achr9G08900_001 N
OBART01G37980 Oryza barthii OBART01G37980 I
OB01G46760 Oryza brachyantha OB01G46760 I
OB05G25740 Oryza brachyantha OB05G25740 I
ORGLA01G0317900 Oryza glaberrima ORGLA01G0317900 I
OGLUM01G42150 Oryza glumaepatula OGLUM01G42150 I
BGIOSGA004837 Oryza indica BGIOSGA004837 I
OLONG_014546 Oryza longistaminata OLONG_014546 I
OMERI01G34950 Oryza meridionalis OMERI01G34950 I
ONIVA04G25730 Oryza nivara ONIVA04G25730 I
ORUFI01G41310 Oryza rufipogon ORUFI01G41310 I
OS01G0859300 Oryza sativa OS01G0859300 I
Pavir.Ea03718 Panicum virgatum Pavir.Ea03718 I
Pavir.J06257 Panicum virgatum Pavir.J06257 I
Pavir.J35078 Panicum virgatum Pavir.J35078 I
Pavir.J36143 Panicum virgatum Pavir.J36143 I
POPTR_0005s21500 Populus trichocarpa POPTR_0005s21500 I
POPTR_0002s06800 Populus trichocarpa POPTR_0002s06800 I
Pm022545 Prunus mume Pm022545 I
29863.m001047 Ricinus communis 29863.m001047 N
29625.m000702 Ricinus communis 29625.m000702 I
SapurV1A.0134s0060 Salix purpurea SapurV1A.0134s0060 I
SapurV1A.0625s0150 Salix purpurea SapurV1A.0625s0150 I
SapurV1A.5129s0010 Salix purpurea SapurV1A.5129s0010 I
Si003247m.g Setaria italica Si003247m.g I
Solyc04g071510.2 Solanum lycopersicum Solyc04g071510.2 I
Solyc01g104650.2 Solanum lycopersicum Solyc01g104650.2 I
PGSC0003DMG400029774 Solanum tuberosum PGSC0003DMG400029774 I
Sb03g040970 Sorghum bicolor Sb03g040970 I
TCM_006432 Theobroma cacao TCM_006432 I
TCM_035623 Theobroma cacao TCM_035623 N
TRAES3BF099600130CFD_g Triticum aestivum TRAES3BF099600130CFD_g I
VIT_18s0072g00470 Vitis vinifera VIT_18s0072g00470 N
GRMZM5G858197 Zea mays GRMZM5G858197 I
GRMZM2G168079 Zea mays GRMZM2G168079 I
GRMZM2G132868 Zea mays GRMZM2G132868 I