Bo1g017860 (Brassica oleracea)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Bo1g017860 T267067_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB39
M07106_2.00 		Arabidopsis thaliana
NYYYACCTAMYWHH
DDWRKTAGGTRRRN		 Dap-seq
OMalley et al.(2016)
MYB39_col_a 		0.859 0.935
MYB39
M07107_2.00 		Arabidopsis thaliana
NYYYACCWAMYWHHHHHHHNH
DNDDDDDDDWRKTWGGTRRRN		 Dap-seq
OMalley et al.(2016)
MYB39_colamp_a 		0.859 0.935
PK28187.1
M01286_2.00 		Cannabis sativa
TACCTACC
GGTAGGTA		 PBM
Lambert et al.(2019)
pTH11305 		0.773 0.774
AtMYB74
M07104_2.00 		Arabidopsis thaliana
NYYYACCTAMYWHH
DDWRKTAGGTRRRN		 Dap-seq
OMalley et al.(2016)
MYB74_colamp_a 		0.743 0.753
AtMYB74
M07105_2.00 		Arabidopsis thaliana
BYHYACCTAMYHHH
DDDRKTAGGTRDRV		 Dap-seq
OMalley et al.(2016)
MYB74_col 		0.743 0.753
MYB49
M07140_2.00 		Arabidopsis thaliana
HDBBYYACCWAMYWH
DWRKTWGGTRRVVHD		 Dap-seq
OMalley et al.(2016)
MYB49_col_a 		0.705 0.763
MYB49
M07141_2.00 		Arabidopsis thaliana
NYYYACCTAMYWHN
NDWRKTAGGTRRRN		 Dap-seq
OMalley et al.(2016)
MYB49_colamp_a 		0.705 0.763
MYB107
M07061_2.00 		Arabidopsis thaliana
NDDWDBBYYACCWAMYHH
DDRKTWGGTRRVVHWHHN		 Dap-seq
OMalley et al.(2016)
MYB107_col_a 		0.704 0.763
MYB107
M07062_2.00 		Arabidopsis thaliana
WNBYYYACCWAMYH
DRKTWGGTRRRVNW		 Dap-seq
OMalley et al.(2016)
MYB107_colamp_a 		0.704 0.763
AtMYB41
M07109_2.00 		Arabidopsis thaliana
DHDBBYYACCTAMYW
WRKTAGGTRRVVHDH		 Dap-seq
OMalley et al.(2016)
MYB41_col_a 		0.679 0.720
MYB92
M07123_2.00 		Arabidopsis thaliana
NHHACCTAMY
RKTAGGTDDN		 Dap-seq
OMalley et al.(2016)
MYB92_100ng20cy_b 		0.675 0.720
MYB92
M07124_2.00 		Arabidopsis thaliana
NNNNWNNYYYACCWAMYHH
DDRKTWGGTRRRNNWNNNN		 Dap-seq
OMalley et al.(2016)
MYB92_colamp_a 		0.675 0.720
MYB106
M11040_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AT3G01140_01 		0.672 0.753
ATMYB13
M06999_2.00 		Arabidopsis thaliana
HYCACCWACCHHHNH
DNDDDGGTWGGTGRD		 Dap-seq
OMalley et al.(2016)
MYB13_col_a 		0.667 0.688
ATMYB13
M07000_2.00 		Arabidopsis thaliana
BYCACCWACCHHHNNHNN
NNDNNDDDGGTWGGTGRV		 Dap-seq
OMalley et al.(2016)
MYB13_colamp_a 		0.667 0.688
AtMYB93
M07020_2.00 		Arabidopsis thaliana
HDNYYYAMCWAMYHHHHHHHH
DDDDDDDDRKTWGKTRRRNHD		 Dap-seq
OMalley et al.(2016)
MYB93_col_a 		0.663 0.753
AtMYB93
M07021_2.00 		Arabidopsis thaliana
NNHNBYYYAMCWAMY
RKTWGKTRRRVNDNN		 Dap-seq
OMalley et al.(2016)
MYB93_colamp_a 		0.663 0.753
MYB58
M07005_2.00 		Arabidopsis thaliana
NNYYYACCWAMCHHH
DDDGKTWGGTRRRNN		 Dap-seq
OMalley et al.(2016)
MYB58_col_a 		0.662 0.720
MYB58
M07006_2.00 		Arabidopsis thaliana
HNNYHYACCWAMCHHHNNNNH
DNNNNDDDGKTWGGTRDRNND		 Dap-seq
OMalley et al.(2016)
MYB58_colamp_a 		0.662 0.720
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo1g017860.1 Myb 15 62
Bo1g017860.1 Myb 68 113

Links

Other Myb/SANT family TFs
Other Brassica oleracea TFs

595 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000011355 Ailuropoda melanoleuca ENSAMEG00000011355 I
Aqu1.219264 Amphimedon queenslandica Aqu1.219264 I
Afo_R014961 Aptenodytes forsteri Afo_R014961 I
ENSAMXG00000000331 Astyanax mexicanus ENSAMXG00000000331 I
ENSAMXG00000004794 Astyanax mexicanus ENSAMXG00000004794 I
ENSAMXG00000011768 Astyanax mexicanus ENSAMXG00000011768 I
ENSAMXG00000019220 Astyanax mexicanus ENSAMXG00000019220 N
ENSP00000307023-D1 Bos grunniens ENSP00000307023-D1 I
KLF11 Bos taurus ENSBTAG00000046218 I
Aan_R015091 Calypte anna Aan_R015091 I
KLF11 Canis familiaris ENSCAFG00000003405 I
CapteG131091 Capitella teleta CapteG131091 I
ENSCSAG00000007163 Chlorocebus sabaeus ENSCSAG00000007163 I
CGI_10024271 Crassostrea gigas CGI_10024271 N
klf13 Danio rerio ENSDARG00000061368 I
zgc:153115 Danio rerio ENSDARG00000069342 N
klf11a Danio rerio ENSDARG00000030844 I
klf11b Danio rerio ENSDARG00000013794 I
KLF11 Dasypus novemcinctus ENSDNOG00000035689 I
ENSDORG00000012974 Dipodomys ordii ENSDORG00000012974 I
KLF11 Echinops telfairi ENSETEG00000002915 I
KLF11 Equus caballus ENSECAG00000015820 I
KLF11 Erinaceus europaeus ENSEEUG00000006894 I
KLF10 Erinaceus europaeus ENSEEUG00000009077 I
KLF11 Felis catus ENSFCAG00000030965 I
ENSGMOG00000002059 Gadus morhua ENSGMOG00000002059 I
ENSGMOG00000017987 Gadus morhua ENSGMOG00000017987 I
KLF11 Gasterosteus aculeatus ENSGACG00000008836 I
ENSGACG00000010739 Gasterosteus aculeatus ENSGACG00000010739 I
zgc:153115 Gasterosteus aculeatus ENSGACG00000016005 I
Gfo_R008822 Geospiza fortis Gfo_R008822 I
KLF11 Gorilla gorilla ENSGGOG00000012494 I
KLF11 Homo sapiens ENSG00000172059 D
ENSSTOG00000002442 Ictidomys tridecemlineatus ENSSTOG00000002442 I
ENSLACG00000018298 Latimeria chalumnae ENSLACG00000018298 I
ENSLOCG00000014806 Lepisosteus oculatus ENSLOCG00000014806 I
LotgiG126249 Lottia gigantea LotgiG126249 I
KLF11 Loxodonta africana ENSLAFG00000032182 I
ENSP00000307023 Macaca fascicularis ENSP00000307023 I
KLF11 Macaca mulatta ENSMMUG00000002054 I
KLF11 Monodelphis domestica ENSMODG00000014758 I
Klf11 Mus musculus ENSMUSG00000020653 I
NEMVEDRAFT_v1g39461 Nematostella vectensis NEMVEDRAFT_v1g39461 I
ENSNLEG00000013701 Nomascus leucogenys ENSNLEG00000013701 I
KLF11 Ochotona princeps ENSOPRG00000013425 I
ENSONIG00000003704 Oreochromis niloticus ENSONIG00000003704 I
ENSONIG00000010668 Oreochromis niloticus ENSONIG00000010668 N
ENSONIG00000015310 Oreochromis niloticus ENSONIG00000015310 I
ENSOANG00000010450 Ornithorhynchus anatinus ENSOANG00000010450 I
KLF11 Ornithorhynchus anatinus ENSOANG00000007790 I
KLF11 Oryctolagus cuniculus ENSOCUG00000003809 I
klf13 Oryzias latipes ENSORLG00000007542 I
KLF11 Oryzias latipes ENSORLG00000015191 I
KLF11 Otolemur garnettii ENSOGAG00000026035 I
ENSOARG00000015319 Ovis aries ENSOARG00000015319 I
KLF11 Pan troglodytes ENSPTRG00000011645 I
ENSPANG00000008644 Papio anubis ENSPANG00000008644 I
ENSPFOG00000004556 Poecilia formosa ENSPFOG00000004556 I
ENSPFOG00000005130 Poecilia formosa ENSPFOG00000005130 I
ENSPFOG00000016517 Poecilia formosa ENSPFOG00000016517 N
ENSPPYG00000012659 Pongo abelii ENSPPYG00000012659 I
KLF11 Procavia capensis ENSPCAG00000011366 I
KLF11 Pteropus vampyrus ENSPVAG00000017463 I
Klf11 Rattus norvegicus ENSRNOG00000054259 I
Sakowv30030659m.g Saccoglossus kowalevskii Sakowv30030659m.g N
ENSSHAG00000005846 Sarcophilus harrisii ENSSHAG00000005846 I
SPU_023727 Strongylocentrotus purpuratus SPU_023727 N
KLF13 Taeniopygia guttata ENSTGUG00000005470 I
KLF11 Takifugu rubripes ENSTRUG00000013598 I
klf13 Takifugu rubripes ENSTRUG00000011759 I
zgc:153115 Takifugu rubripes ENSTRUG00000003801 I
klf13 Tetraodon nigroviridis ENSTNIG00000008397 I
zgc:153115 Tetraodon nigroviridis ENSTNIG00000007828 I
TC000837 Tribolium castaneum TC000837 I
TriadG8990 Trichoplax adhaerens TriadG8990 N
KLF11 Tupaia belangeri ENSTBEG00000008268 I
KLF11 Tursiops truncatus ENSTTRG00000017207 I
Tal_R011003 Tyto alba Tal_R011003 I
ENSXMAG00000003301 Xiphophorus maculatus ENSXMAG00000003301 I
ENSXMAG00000004532 Xiphophorus maculatus ENSXMAG00000004532 N
ENSXMAG00000010947 Xiphophorus maculatus ENSXMAG00000010947 I