Bra001311 (Brassica rapa)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Bra001311 T267695_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Bra001311.1-P Myb 58 104
Bra001311.1-P Myb 110 156
Bra001311.1-P Myb 162 207

Links

Other Myb/SANT family TFs
Other Brassica rapa TFs

35 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00012p00208260 Amborella trichopoda AMTR_s00012p00208260 I 0.708
fgenesh1_pg.C_scaffold_3000839 Arabidopsis lyrata fgenesh1_pg.C_scaffold_3000839 I 0.667
Bostr.22252s0130 Boechera stricta Bostr.22252s0130 I 0.674
Bo1g144510 Brassica oleracea Bo1g144510 I 0.703
Bo5g139340 Brassica oleracea Bo5g139340 I 0.710
Bo3g062020 Brassica oleracea Bo3g062020 N 0.841
Bra034067 Brassica rapa Bra034067 I 0.703
Bra029762 Brassica rapa Bra029762 I 0.709
PK11664.1 Cannabis sativa PK11664.1 I 0.676
evm.TU.supercontig_228.17 Carica papaya evm.TU.supercontig_228.17 I 0.662
Ciclev10011452m.g Citrus clementina Ciclev10011452m.g I 0.700
orange1.1g009402m.g Citrus sinensis orange1.1g009402m.g I 0.700
Eucgr.K03133 Eucalyptus grandis Eucgr.K03133 I 0.662
Thhalv10013211m.g Eutrema salsugineum Thhalv10013211m.g I 0.661
Thhalv10020579m.g Eutrema salsugineum Thhalv10020579m.g I 0.723
GLYMA07G15820 Glycine max GLYMA07G15820 I 0.673
Gorai.006G172800 Gossypium raimondii Gorai.006G172800 I 0.680
Gorai.001G249400 Gossypium raimondii Gorai.001G249400 I 0.669
LPERR01G31650 Leersia perrieri LPERR01G31650 I 0.671
Lus10025351.g Linum usitatissimum Lus10025351.g I 0.662
Lus10024394.g Linum usitatissimum Lus10024394.g I 0.662
chr1.CM0147.520.nd Lotus japonicus chr1.CM0147.520.nd I 0.680
cassava12645.valid.m1 Manihot esculenta cassava12645.valid.m1 I 0.676
GSMUA_Achr10G26610_001 Musa acuminata GSMUA_Achr10G26610_001 I 0.677
POPTR_0006s08570 Populus trichocarpa POPTR_0006s08570 I 0.694
Pm002704 Prunus mume Pm002704 I 0.689
PRUPE_ppa003208mg Prunus persica PRUPE_ppa003208mg I 0.689
29846.m000184 Ricinus communis 29846.m000184 I 0.694
SapurV1A.0001s1810 Salix purpurea SapurV1A.0001s1810 I 0.696
TCM_021936 Theobroma cacao TCM_021936 I 0.669
Traes_3DL_6BBC889A1 Triticum aestivum Traes_3DL_6BBC889A1 I 0.671
TRAES3BF104600030CFD_g Triticum aestivum TRAES3BF104600030CFD_g I 0.671
Traes_3AL_386795528 Triticum aestivum Traes_3AL_386795528 I 0.671
VIT_08s0007g00360 Vitis vinifera VIT_08s0007g00360 I 0.674
VIT_04s0008g03780 Vitis vinifera VIT_04s0008g03780 I 0.663