Bra025299 (Brassica rapa)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Bra025299 T267980_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB118
M07087_2.00 		Arabidopsis thaliana
DHWDHRDMCGTTACDWW
WWHGTAACGKHYDHWDH		 Dap-seq
OMalley et al.(2016)
MYB118_col_a 		0.811 0.860
MYB118
M07088_2.00 		Arabidopsis thaliana
DWWWYGTAACGKHYR
YRDMCGTTACRWWWH		 Dap-seq
OMalley et al.(2016)
MYB118_colamp_a 		0.811 0.860
MYB98
M02301_2.00 		Arabidopsis thaliana
NNGTAACGKMN
NKMCGTTACNN		 PBM
Weirauch et al.(2014)
pTH8148 		0.669 0.774
MYB98
M07108_2.00 		Arabidopsis thaliana
DWWWHGTAACGKWHD
HDWMCGTTACDWWWH		 Dap-seq
OMalley et al.(2016)
MYB98_col_a 		0.669 0.774
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra025299.1-P Myb 226 272
Bra025299.1-P Myb 278 323

Links

Other Myb/SANT family TFs
Other Brassica rapa TFs

106 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ARB_05762 Arthroderma benhamiae ARB_05762 N
fgenesh1_pg.00152_#_174 Aspergillus carbonarius fgenesh1_pg.00152_#_174 I
ACLA_094570 Aspergillus clavatus CADACLAG00008883 I
CADAFLAG00006470 Aspergillus flavus CADAFLAG00006470 I
ANIA_07661 Aspergillus nidulans CADANIAG00000786 D
CADANGAG00003527 Aspergillus niger CADANGAG00003527 I
CADAORAG00010733 Aspergillus oryzae CADAORAG00010733 I
EURHEDRAFT_518478 Aspergillus ruber EURHEDRAFT_518478 I
PVAR5_5675 Byssochlamys spectabilis PVAR5_5675 I
PGUG_02866 Candida guilliermondii PGUG_02866 I
G210_3997 Candida maltosa G210_3997 I
CANTEDRAFT_107875 Candida tenuis CANTEDRAFT_107875 I
A1O3_02176 Capronia epimyces A1O3_02176 I
PV04_01709 Capronia semiimmersa PV04_01709 I
Z519_03196 Cladophialophora bantiana Z519_03196 I
G647_00393 Cladophialophora carrionii G647_00393 I
PV07_10364 Cladophialophora immunda PV07_10364 I
A1O5_03878 Cladophialophora psammophila A1O5_03878 I
A1O7_00358 Cladophialophora yegresii A1O7_00358 I
HMPREF1541_02336 Cyphellophora europaea HMPREF1541_02336 I
A1O9_05772 Exophiala aquamarina A1O9_05772 N
HMPREF1120_05852 Exophiala dermatitidis HMPREF1120_05852 N
PV10_01908 Exophiala mesophila PV10_01908 N
PV06_03988 Exophiala oligosperma PV06_03988 N
PV11_08528 Exophiala sideris PV11_08528 N
PV08_06249 Exophiala spinifera PV08_06249 N
PV05_10994 Exophiala xenobiotica PV05_10994 N
Z517_08575 Fonsecaea pedrosoi Z517_08575 I
CMQ_3920 Grosmannia clavigera CMQ_3920 I
PAS_chr3_0712 Komagataella pastoris PAS_chr3_0712 I
KUCA_T00002265001 Kuraishia capsulata KUCA_T00002265001 I
MBM_07620 Marssonina brunnea MBM_07620 I
PGUG_02866 Meyerozyma guilliermondii PGUG_02866 I
MGYG_00747 Microsporum gypseum MGYG_00747 N
PDE_04633 Penicillium oxalicum PDE_04633 I
XP_002492941.1 Pichia pastoris XP_002492941.1 I
estExt_genewise1_human.C_chr_5.10129 Pichia stipitis estExt_genewise1_human.C_chr_5.10129 I
Z518_03696 Rhinocladiella mackenziei Z518_03696 I
PICST_72282 Scheffersomyces stipitis PICST_72282 I
TEQG_02573 Trichophyton equinum TEQG_02573 N
H101_06801 Trichophyton interdigitale H101_06801 N
H102_08016 Trichophyton rubrum H102_08016 N
H105_08042 Trichophyton soudanense H105_08042 N
TESG_02135 Trichophyton tonsurans TESG_02135 N
TRV_04480 Trichophyton verrucosum TRV_04480 N