Bra030689 (Brassica rapa)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Bra030689 T268050_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TRP5
M01266_2.00 		Arabidopsis thaliana
NHWAAACCYH
DRGGTTTWDN		 PBM
Lambert et al.(2019)
pTH9963 		0.909 1.000
PK21687.1
M01282_2.00 		Cannabis sativa
HWAAACCYH
DRGGTTTWD		 PBM
Lambert et al.(2019)
pTH11299 		0.849 0.957
TRP2
M07092_2.00 		Arabidopsis thaliana
AAACCCTAAACCCTAAACCC
GGGTTTAGGGTTTAGGGTTT		 Dap-seq
OMalley et al.(2016)
TRP2_col_a 		0.841 0.936
TRP2
M07093_2.00 		Arabidopsis thaliana
AAACCCTAAACCCTAAACCCT
AGGGTTTAGGGTTTAGGGTTT		 Dap-seq
OMalley et al.(2016)
TRP2_colamp_a 		0.841 0.936
TRP1
M07148_2.00 		Arabidopsis thaliana
AAACCCTAAACCCTAAACCCTAA
TTAGGGTTTAGGGTTTAGGGTTT		 Dap-seq
OMalley et al.(2016)
TRP1_col 		0.831 0.957
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra030689.1-P Myb 505 555

Links

Other Myb/SANT family TFs
Other Brassica rapa TFs

197 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000005976 Ailuropoda melanoleuca ENSAMEG00000005976 I 0.000
Alligator_sinensis_CCG008430.1 Alligator sinensis Alligator_sinensis_CCG008430.1 I 0.000
Alligator_sinensis_CCG015622.1 Alligator sinensis Alligator_sinensis_CCG015622.1 I 0.000
ENSAPLG00000014646 Anas platyrhynchos ENSAPLG00000014646 I 0.000
IRF8 Anolis carolinensis ENSACAG00000005409 I 0.000
IRF4 Anolis carolinensis ENSACAG00000017711 I 0.000
Afo_R014746 Aptenodytes forsteri Afo_R014746 I 0.000
ENSAMXG00000003452 Astyanax mexicanus ENSAMXG00000003452 I 0.000
ENSAMXG00000004911 Astyanax mexicanus ENSAMXG00000004911 I 0.000
ENSAMXG00000006093 Astyanax mexicanus ENSAMXG00000006093 I 0.000
ENSAMXG00000016370 Astyanax mexicanus ENSAMXG00000016370 I 0.000
ENSP00000268638-D1 Bos grunniens ENSP00000268638-D1 I 0.000
ENSP00000370343-D1 Bos grunniens ENSP00000370343-D1 I 0.000
IRF4 Bos taurus ENSBTAG00000002929 I 0.000
IRF8 Bos taurus ENSBTAG00000017824 I 0.000
Brh_R000433 Buceros rhinoceros Brh_R000433 I 0.000
Brh_R009589 Buceros rhinoceros Brh_R009589 I 0.000
IRF8 Callithrix jacchus ENSCJAG00000017331 I 0.000
IRF4 Callithrix jacchus ENSCJAG00000019524 I 0.000
Aan_R009222 Calypte anna Aan_R009222 I 0.000
Aan_R012662 Calypte anna Aan_R012662 I 0.000
IRF4 Cavia porcellus ENSCPOG00000003562 I 0.000
ENSCPOG00000027266 Cavia porcellus ENSCPOG00000027266 I 0.000
Cmyd_10011521 Chelonia mydas Cmyd_10011521 I 0.000
Cmyd_10021085 Chelonia mydas Cmyd_10021085 I 0.000
ENSCSAG00000003142 Chlorocebus sabaeus ENSCSAG00000003142 I 0.000
ENSCSAG00000007164 Chlorocebus sabaeus ENSCSAG00000007164 I 0.000
irf4a Danio rerio ENSDARG00000006560 I 0.000
irf4b Danio rerio ENSDARG00000055374 I 0.000
irf8 Danio rerio ENSDARG00000056407 I 0.000
IRF8 Dasypus novemcinctus ENSDNOG00000038898 I 0.000
Irf4 Dipodomys ordii ENSDORG00000014895 I 0.000
IRF4 Echinops telfairi ENSETEG00000018472 I 0.000
IRF4 Equus caballus ENSECAG00000016808 I 0.000
IRF4 Felis catus ENSFCAG00000022941 I 0.000
ENSFALG00000013071 Ficedula albicollis ENSFALG00000013071 I 0.000
IRF8 Gallus gallus ENSGALG00000005757 I 0.000
ENSGALG00000012830 Gallus gallus ENSGALG00000012830 I 0.000
irf8 Gasterosteus aculeatus ENSGACG00000015958 I 0.000
Gfo_R000501 Geospiza fortis Gfo_R000501 I 0.000
Gfo_R003357 Geospiza fortis Gfo_R003357 I 0.000
IRF4 Gorilla gorilla ENSGGOG00000012342 I 0.000
IRF8 Gorilla gorilla ENSGGOG00000028251 I 0.000
IRF4 Homo sapiens ENSG00000137265 D 0.000
IRF8 Homo sapiens ENSG00000140968 D 0.000
ENSSTOG00000011470 Ictidomys tridecemlineatus ENSSTOG00000011470 I 0.000
ENSSTOG00000028363 Ictidomys tridecemlineatus ENSSTOG00000028363 I 0.000
ENSLACG00000004633 Latimeria chalumnae ENSLACG00000004633 I 0.000
ENSLACG00000005859 Latimeria chalumnae ENSLACG00000005859 I 0.000
ENSLOCG00000001013 Lepisosteus oculatus ENSLOCG00000001013 I 0.000
ENSLOCG00000013008 Lepisosteus oculatus ENSLOCG00000013008 I 0.000
IRF8 Loxodonta africana ENSLAFG00000010973 I 0.000
IRF4 Loxodonta africana ENSLAFG00000017235 I 0.000
ENSP00000268638 Macaca fascicularis ENSP00000268638 I 0.000
IRF8 Macaca mulatta ENSMMUG00000008125 I 0.000
IRF4 Macaca mulatta ENSMMUG00000018513 I 0.000
IRF8 Monodelphis domestica ENSMODG00000004572 I 0.000
ENSMPUG00000007848 Mustela putorius furo ENSMPUG00000007848 I 0.000
ENSMPUG00000008641 Mustela putorius furo ENSMPUG00000008641 I 0.000
Irf4 Mus musculus ENSMUSG00000021356 D 0.000
Irf8 Mus musculus ENSMUSG00000041515 D 0.000
IRF4 Myotis lucifugus ENSMLUG00000010058 I 0.000
ENSNLEG00000010631 Nomascus leucogenys ENSNLEG00000010631 I 0.000
ENSNLEG00000011429 Nomascus leucogenys ENSNLEG00000011429 I 0.000
IRF8 Ochotona princeps ENSOPRG00000002139 I 0.000
IRF4 Ochotona princeps ENSOPRG00000012683 I 0.000
Ogr05775 Ophisaurus gracilis Ogr05775 I 0.000
ENSONIG00000005631 Oreochromis niloticus ENSONIG00000005631 I 0.000
ENSONIG00000006398 Oreochromis niloticus ENSONIG00000006398 I 0.000
ENSONIG00000006624 Oreochromis niloticus ENSONIG00000006624 I 0.000
IRF8 Ornithorhynchus anatinus ENSOANG00000003741 I 0.000
IRF4 Oryctolagus cuniculus ENSOCUG00000009374 I 0.000
irf4b Oryzias latipes ENSORLG00000012712 I 0.000
irf9 Oryzias latipes ENSORLG00000013335 I 0.000
irf8 Oryzias latipes ENSORLG00000018216 I 0.000
IRF8 Otolemur garnettii ENSOGAG00000009262 I 0.000
IRF4 Otolemur garnettii ENSOGAG00000014574 I 0.000
IRF9 Otolemur garnettii ENSOGAG00000026670 I 0.000
ENSOARG00000003822 Ovis aries ENSOARG00000003822 I 0.000
ENSOARG00000011513 Ovis aries ENSOARG00000011513 I 0.000
IRF8 Pan troglodytes ENSPTRG00000008435 I 0.000
IRF4 Pan troglodytes ENSPTRG00000017656 I 0.000
ENSPANG00000024770 Papio anubis ENSPANG00000024770 I 0.000
ENSPSIG00000011619 Pelodiscus sinensis ENSPSIG00000011619 I 0.000
ENSPSIG00000011788 Pelodiscus sinensis ENSPSIG00000011788 I 0.000
ENSPFOG00000000657 Poecilia formosa ENSPFOG00000000657 I 0.000
ENSPFOG00000017639 Poecilia formosa ENSPFOG00000017639 I 0.000
ENSPFOG00000021810 Poecilia formosa ENSPFOG00000021810 I 0.000
Pvit_16863 Pogona vitticeps Pvit_16863 I 0.000
ENSPPYG00000007620 Pongo abelii ENSPPYG00000007620 I 0.000
ENSPPYG00000016161 Pongo abelii ENSPPYG00000016161 I 0.000
IRF8 Procavia capensis ENSPCAG00000004460 I 0.000
IRF4 Pteropus vampyrus ENSPVAG00000005078 I 0.000
Irf8 Rattus norvegicus ENSRNOG00000017869 I 0.000
Irf4 Rattus norvegicus ENSRNOG00000061070 I 0.000
ENSSHAG00000006901 Sarcophilus harrisii ENSSHAG00000006901 I 0.000
ENSSSCG00000023184 Sus scrofa ENSSSCG00000023184 I 0.000
IRF4 Taeniopygia guttata ENSTGUG00000002144 I 0.000
irf4b Takifugu rubripes ENSTRUG00000002946 I 0.000
irf9 Takifugu rubripes ENSTRUG00000017722 I 0.000
irf8 Takifugu rubripes ENSTRUG00000018213 I 0.000
irf4b Tetraodon nigroviridis ENSTNIG00000008222 I 0.000
irf9 Tetraodon nigroviridis ENSTNIG00000008698 I 0.000
irf8 Tetraodon nigroviridis ENSTNIG00000009283 I 0.000
IRF4 Tupaia belangeri ENSTBEG00000012240 I 0.000
IRF8 Tupaia belangeri ENSTBEG00000013828 I 0.000
irf8.L Xenopus laevis XB-GENE-985949 I 0.000
ENSXMAG00000003082 Xiphophorus maculatus ENSXMAG00000003082 I 0.000
ENSXMAG00000004567 Xiphophorus maculatus ENSXMAG00000004567 I 0.000
ENSXMAG00000006246 Xiphophorus maculatus ENSXMAG00000006246 I 0.000