CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

GRMZM5G887276 *(Zea mays)* Myb/SANT
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00249 (Myb_DNA-binding)	IPR014778	GRMZM5G887276	T272218_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
PK26523.1 M01283_2.00	Cannabis sativa	NWHATTCYNN	NNRGAATDWN	PBM Lambert et al.(2019) pTH11304	0.727	0.809
AT2G40260 M07057_2.00	Arabidopsis thaliana	HHWDWAHATTCYHTN	NADRGAATDTWHWDD	Dap-seq OMalley et al.(2016) AT2G40260_col_a	0.706	0.745
AT2G40260 M07058_2.00	Arabidopsis thaliana	NNDDWHHNDDWAHATTCYHT	ADRGAATDTWHHNDDWHHNN	Dap-seq OMalley et al.(2016) AT2G40260_colamp_a	0.706	0.745
AT1G14600 M01268_2.00	Arabidopsis thaliana	NWAYATTCYN	NRGAATRTWN	PBM Lambert et al.(2019) pTH11557	0.695	0.787
PHR1 M02329_2.00	Oryza sativa	NWKATNCBNN	NNVGNATMWN	PBM Weirauch et al.(2014) pTH7755	0.691	0.745
PHL6 M02295_2.00	Arabidopsis thaliana	NNWKATNCBN	NVGNATMWNN	PBM Weirauch et al.(2014) pTH7071	0.681	0.681
PHL6 M07083_2.00	Arabidopsis thaliana	NDGAAAACH	DGTTTTCHN	Dap-seq OMalley et al.(2016) At3g13040_col_b	0.681	0.681
For this family, TFs with SR scores > 0.661* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
GRMZM5G887276_P03	Myb	28	79	RLRWTPDLHHCFVHAIHKLGGQDKATPKRVLQLMGVGGLTISHVKSHLQMYR

Links
Other Myb/SANT family TFs
Other *Zea mays* TFs