MTR_0247s0040 (Medicago truncatula)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 MTR_0247s0040 T274672_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB113
M07026_2.00 		Arabidopsis thaliana
VTAACKRAHTH
DADTYMGTTAB		 Dap-seq
OMalley et al.(2016)
MYB113_col_a 		0.722 0.774
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
KEH16283 Myb 9 56
KEH16283 Myb 62 107

Links

Other Myb/SANT family TFs
Other Medicago truncatula TFs

66 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_047_00006 Aquilegia coerulea Aquca_047_00006 I 0.666
fgenesh1_pg.C_scaffold_2000950 Arabidopsis lyrata fgenesh1_pg.C_scaffold_2000950 I 0.670
scaffold_201356.1 Arabidopsis lyrata scaffold_201356.1 I 0.679
scaffold_201357.1 Arabidopsis lyrata scaffold_201357.1 I 0.727
ATMYB90 Arabidopsis lyrata scaffold_201358.1 I 0.733
MYB113 Arabidopsis lyrata fgenesh2_kg.2__869__AT1G66370.1 I 0.699
PAP1 Arabidopsis lyrata fgenesh2_kg.1__4777__AT1G56650.1 I 0.733
MYB75 Arabidopsis thaliana AT1G56650 I 0.733
MYB90 Arabidopsis thaliana AT1G66390 I 0.733
MYB114 Arabidopsis thaliana AT1G66380 I 0.733
MYB113 Arabidopsis thaliana AT1G66370 D 0.722
Bostr.26959s0279 Boechera stricta Bostr.26959s0279 I 0.730
Bo6g100940 Brassica oleracea Bo6g100940 I 0.739
Bo6g099880 Brassica oleracea Bo6g099880 I 0.742
Bo00835s060 Brassica oleracea Bo00835s060 I 0.722
Bra001917 Brassica rapa Bra001917 I 0.722
Bra004162 Brassica rapa Bra004162 I 0.739
Bra039763 Brassica rapa Bra039763 I 0.722
PK17827.1 Cannabis sativa PK17827.1 I 0.712
PK05760.1 Cannabis sativa PK05760.1 I 0.721
Cagra.0463s0006 Capsella grandiflora Cagra.0463s0006 I 0.726
Cagra.0463s0007 Capsella grandiflora Cagra.0463s0007 I 0.688
Cagra.0463s0008 Capsella grandiflora Cagra.0463s0008 I 0.721
Cagra.2400s0001 Capsella grandiflora Cagra.2400s0001 I 0.715
Cagra.2629s0007 Capsella grandiflora Cagra.2629s0007 I 0.733
Carubv10020856m.g Capsella rubella Carubv10020856m.g I 0.715
Carubv10020888m.g Capsella rubella Carubv10020888m.g I 0.686
evm.TU.supercontig_2742.1 Carica papaya evm.TU.supercontig_2742.1 I 0.699
evm.TU.supercontig_116.38 Carica papaya evm.TU.supercontig_116.38 I 0.699
Ciclev10013455m.g Citrus clementina Ciclev10013455m.g I 0.721
Eucgr.H04157 Eucalyptus grandis Eucgr.H04157 I 0.667
Thhalv10019041m.g Eutrema salsugineum Thhalv10019041m.g I 0.733
gene31413-v1.0-hybrid Fragaria vesca gene31413-v1.0-hybrid I 0.684
GLYMA09G36966 Glycine max GLYMA09G36966 I 0.661
Gorai.001G087200 Gossypium raimondii Gorai.001G087200 I 0.737
Gorai.001G087400 Gossypium raimondii Gorai.001G087400 I 0.737
Lus10000470.g Linum usitatissimum Lus10000470.g I 0.678
Lus10042522.g Linum usitatissimum Lus10042522.g I 0.680
MTR_0001s0360 Medicago truncatula MTR_0001s0360 I 0.701
MTR_5g079120 Medicago truncatula MTR_5g079120 I 0.766
MTR_0193s0090 Medicago truncatula MTR_0193s0090 I 0.862
MTR_5g078800 Medicago truncatula MTR_5g078800 I 0.734
MTR_5g078950 Medicago truncatula MTR_5g078950 I 0.711
MTR_5g079220 Medicago truncatula MTR_5g079220 I 0.706
MTR_5g079290 Medicago truncatula MTR_5g079290 I 0.713
MTR_7g017260 Medicago truncatula MTR_7g017260 I 0.743
MTR_8g060940 Medicago truncatula MTR_8g060940 I 0.705
MTR_5g078930 Medicago truncatula MTR_5g078930 I 0.691
MTR_5g078910 Medicago truncatula MTR_5g078910 I 0.721
MTR_5g078860 Medicago truncatula MTR_5g078860 I 0.719
mgf019317m Mimulus guttatus mgf019317m I 0.679
Pm029445 Prunus mume Pm029445 I 0.715
Pm029442 Prunus mume Pm029442 I 0.694
Pm029440 Prunus mume Pm029440 I 0.688
PRUPE_ppa026640mg Prunus persica PRUPE_ppa026640mg I 0.691
27763.m000042 Ricinus communis 27763.m000042 I 0.687
Solyc10g086250.1 Solanum lycopersicum Solyc10g086250.1 I 0.711
Solyc10g086260.1 Solanum lycopersicum Solyc10g086260.1 I 0.718
Solyc10g086270.1 Solanum lycopersicum Solyc10g086270.1 I 0.718
Solyc10g086290.1 Solanum lycopersicum Solyc10g086290.1 I 0.721
TCM_019192 Theobroma cacao TCM_019192 I 0.728
TCM_026054 Theobroma cacao TCM_026054 I 0.682
VIT_02s0033g00390 Vitis vinifera VIT_02s0033g00390 I 0.672
VIT_02s0033g00410 Vitis vinifera VIT_02s0033g00410 I 0.695
VIT_02s0033g00450 Vitis vinifera VIT_02s0033g00450 I 0.695
VIT_14s0006g01290 Vitis vinifera VIT_14s0006g01290 I 0.703