MTR_5g078800 (Medicago truncatula)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 MTR_5g078800 T274871_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB113
M07026_2.00 		Arabidopsis thaliana
VTAACKRAHTH
DADTYMGTTAB		 Dap-seq
OMalley et al.(2016)
MYB113_col_a 		0.764 0.774
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AES99291 Myb 9 56
AES99291 Myb 62 107

Links

Other Myb/SANT family TFs
Other Medicago truncatula TFs

113 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_10624 Aegilops tauschii F775_10624 N
F775_11347 Aegilops tauschii F775_11347 I
F775_14190 Aegilops tauschii F775_14190 I
F775_18830 Aegilops tauschii F775_18830 N
F775_19744 Aegilops tauschii F775_19744 N
AMTR_s00009p00242790 Amborella trichopoda AMTR_s00009p00242790 I
GLYMA03G30940 Glycine max GLYMA03G30940 I
Gorai.001G012400 Gossypium raimondii Gorai.001G012400 I
MLOC_38470 Hordeum vulgare MLOC_38470 N
LPERR08G11070 Leersia perrieri LPERR08G11070 N
LPERR04G17400 Leersia perrieri LPERR04G17400 I
LPERR04G17390 Leersia perrieri LPERR04G17390 N
LPERR04G17380 Leersia perrieri LPERR04G17380 N
cassava8594.m1 Manihot esculenta cassava8594.m1 I
GSMUA_Achr11G21270_001 Musa acuminata GSMUA_Achr11G21270_001 I
GSMUA_Achr3G10120_001 Musa acuminata GSMUA_Achr3G10120_001 I
GSMUA_Achr5G20600_001 Musa acuminata GSMUA_Achr5G20600_001 N
GSMUA_Achr9G18080_001 Musa acuminata GSMUA_Achr9G18080_001 I
OBART01G20350 Oryza barthii OBART01G20350 N
OBART04G21320 Oryza barthii OBART04G21320 N
OBART04G21370 Oryza barthii OBART04G21370 N
OB04G28390 Oryza brachyantha OB04G28390 N
OB02G27530 Oryza brachyantha OB02G27530 N
OB04G28350 Oryza brachyantha OB04G28350 N
OB04G28380 Oryza brachyantha OB04G28380 N
OB01G30110 Oryza brachyantha OB01G30110 N
ORGLA11G0077500 Oryza glaberrima ORGLA11G0077500 N
ORGLA04G0183900 Oryza glaberrima ORGLA04G0183900 N
ORGLA04G0183800 Oryza glaberrima ORGLA04G0183800 N
OGLUM01G23970 Oryza glumaepatula OGLUM01G23970 N
OGLUM04G21260 Oryza glumaepatula OGLUM04G21260 N
BGIOSGA015472 Oryza indica BGIOSGA015472 N
BGIOSGA014567 Oryza indica BGIOSGA014567 N
BGIOSGA014566 Oryza indica BGIOSGA014566 N
BGIOSGA014565 Oryza indica BGIOSGA014565 N
BGIOSGA003821 Oryza indica BGIOSGA003821 N
BGIOSGA003819 Oryza indica BGIOSGA003819 N
OLONG_009946 Oryza longistaminata OLONG_009946 N
OLONG_016958 Oryza longistaminata OLONG_016958 N
OLONG_016960 Oryza longistaminata OLONG_016960 N
OMERI01G18860 Oryza meridionalis OMERI01G18860 N
OMERI04G17820 Oryza meridionalis OMERI04G17820 N
OMERI04G17790 Oryza meridionalis OMERI04G17790 N
OMERI01G18770 Oryza meridionalis OMERI01G18770 N
ONIVA01G22980 Oryza nivara ONIVA01G22980 N
ONIVA04G19650 Oryza nivara ONIVA04G19650 N
ONIVA04G19860 Oryza nivara ONIVA04G19860 N
ONIVA01G22920 Oryza nivara ONIVA01G22920 N
OPUNC04G19030 Oryza punctata OPUNC04G19030 N
OPUNC04G19040 Oryza punctata OPUNC04G19040 N
ORUFI01G23050 Oryza rufipogon ORUFI01G23050 N
ORUFI11G09150 Oryza rufipogon ORUFI11G09150 N
ORUFI04G22910 Oryza rufipogon ORUFI04G22910 N
ORUFI04G22890 Oryza rufipogon ORUFI04G22890 N
OS04G0557200 Oryza sativa OS04G0557200 N
OS04G0557800 Oryza sativa OS04G0557800 N
Pavir.J34298 Panicum virgatum Pavir.J34298 N
Pavir.Gb01093 Panicum virgatum Pavir.Gb01093 N
Pavir.Cb00833 Panicum virgatum Pavir.Cb00833 N
PDK_20s1464821g001 Phoenix dactylifera PDK_20s1464821g001 I
POPTR_0006s13790 Populus trichocarpa POPTR_0006s13790 I
29739.m003684 Ricinus communis 29739.m003684 I
SapurV1A.0249s0140 Salix purpurea SapurV1A.0249s0140 I
Si000845m.g Setaria italica Si000845m.g I
Si012401m.g Setaria italica Si012401m.g I
PGSC0003DMG402030621 Solanum tuberosum PGSC0003DMG402030621 I
Sb06g025040 Sorghum bicolor Sb06g025040 I
Sb06g025020 Sorghum bicolor Sb06g025020 N
Sb06g025060 Sorghum bicolor Sb06g025060 I
TCM_037645 Theobroma cacao TCM_037645 I
Traes_2DL_099D4CA9B Triticum aestivum Traes_2DL_099D4CA9B N
Traes_2AL_4F71A8FB4 Triticum aestivum Traes_2AL_4F71A8FB4 N
TRIUR3_18279 Triticum urartu TRIUR3_18279 N
TRIUR3_26157 Triticum urartu TRIUR3_26157 N
TRIUR3_35186 Triticum urartu TRIUR3_35186 N
GRMZM5G822829 Zea mays GRMZM5G822829 N
GRMZM2G172795 Zea mays GRMZM2G172795 I