OLONG_025333 (Oryza longistaminata)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 OLONG_025333 T275998_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK21687.1
M01282_2.00 		Cannabis sativa
HWAAACCYH
DRGGTTTWD		 PBM
Lambert et al.(2019)
pTH11299 		0.909 0.957
TRP2
M07092_2.00 		Arabidopsis thaliana
AAACCCTAAACCCTAAACCC
GGGTTTAGGGTTTAGGGTTT		 Dap-seq
OMalley et al.(2016)
TRP2_col_a 		0.901 0.936
TRP2
M07093_2.00 		Arabidopsis thaliana
AAACCCTAAACCCTAAACCCT
AGGGTTTAGGGTTTAGGGTTT		 Dap-seq
OMalley et al.(2016)
TRP2_colamp_a 		0.901 0.936
TRP1
M07148_2.00 		Arabidopsis thaliana
AAACCCTAAACCCTAAACCCTAA
TTAGGGTTTAGGGTTTAGGGTTT		 Dap-seq
OMalley et al.(2016)
TRP1_col 		0.891 0.957
TRP5
M01266_2.00 		Arabidopsis thaliana
NHWAAACCYH
DRGGTTTWDN		 PBM
Lambert et al.(2019)
pTH9963 		0.849 0.957
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OLONG_025333-R1 Myb 629 679
OLONG_025333-R2 Myb 591 641

Links

Other Myb/SANT family TFs
Other Oryza longistaminata TFs

198 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00069p00132820 Amborella trichopoda AMTR_s00069p00132820 I
AMTR_s00058p00066390 Amborella trichopoda AMTR_s00058p00066390 I
BRADI1G54450 Brachypodium distachyon BRADI1G54450 I
PK28640.1 Cannabis sativa PK28640.1 I
evm.TU.supercontig_18.194 Carica papaya evm.TU.supercontig_18.194 I
Ca_25424 Cicer arietinum Ca_25424 I
Ca_16397 Cicer arietinum Ca_16397 I
Ca_00417 Cicer arietinum Ca_00417 I
Cla005054 Citrullus lanatus Cla005054 N
Ciclev10023764m.g Citrus clementina Ciclev10023764m.g I
orange1.1g037119m.g Citrus sinensis orange1.1g037119m.g I
Cucsa.193280 Cucumis sativus Cucsa.193280 N
Eucgr.J01042 Eucalyptus grandis Eucgr.J01042 N
gene01844-v1.0-hybrid Fragaria vesca gene01844-v1.0-hybrid N
gene16905-v1.0-hybrid Fragaria vesca gene16905-v1.0-hybrid I
GLYMA13G29920 Glycine max GLYMA13G29920 N
GLYMA15G09190 Glycine max GLYMA15G09190 N
GLYMA03G01931 Glycine max GLYMA03G01931 I
GLYMA07G08542 Glycine max GLYMA07G08542 I
Gorai.008G116800 Gossypium raimondii Gorai.008G116800 I
Gorai.004G127900 Gossypium raimondii Gorai.004G127900 N
Gorai.007G260900 Gossypium raimondii Gorai.007G260900 I
Gorai.008G178900 Gossypium raimondii Gorai.008G178900 I
MLOC_18783 Hordeum vulgare MLOC_18783 I
LPERR12G14340 Leersia perrieri LPERR12G14340 I
Lus10008291.g Linum usitatissimum Lus10008291.g N
Lus10013764.g Linum usitatissimum Lus10013764.g I
Lus10036556.g Linum usitatissimum Lus10036556.g I
Lus10039171.g Linum usitatissimum Lus10039171.g I
Lus10041372.g Linum usitatissimum Lus10041372.g I
LjT06B04.30.nd Lotus japonicus LjT06B04.30.nd N
MDP0000127123 Malus domestica MDP0000127123 N
MDP0000316843 Malus domestica MDP0000316843 N
MDP0000138669 Malus domestica MDP0000138669 I
MDP0000133476 Malus domestica MDP0000133476 I
cassava40212.m1 Manihot esculenta cassava40212.m1 I
cassava47343.m1 Manihot esculenta cassava47343.m1 N
MTR_4g082345 Medicago truncatula MTR_4g082345 I
MTR_8g032610 Medicago truncatula MTR_8g032610 I
mgf018851m Mimulus guttatus mgf018851m I
mgf024137m Mimulus guttatus mgf024137m N
GSMUA_Achr3G12350_001 Musa acuminata GSMUA_Achr3G12350_001 I
OMERI09G12500 Oryza meridionalis OMERI09G12500 I
OPUNC09G15300 Oryza punctata OPUNC09G15300 I
ORUFI09G18220 Oryza rufipogon ORUFI09G18220 I
POPTR_0001s45740 Populus trichocarpa POPTR_0001s45740 N
POPTR_0014s07280 Populus trichocarpa POPTR_0014s07280 I
Pm008788 Prunus mume Pm008788 I
PRUPE_ppa019500mg Prunus persica PRUPE_ppa019500mg N
PRUPE_ppa022202mg Prunus persica PRUPE_ppa022202mg I
30174.m008961 Ricinus communis 30174.m008961 I
SapurV1A.2432s0010 Salix purpurea SapurV1A.2432s0010 I
SELMODRAFT_409196 Selaginella moellendorffii SELMODRAFT_409196 N
SELMODRAFT_411255 Selaginella moellendorffii SELMODRAFT_411255 N
SELMODRAFT_73140 Selaginella moellendorffii SELMODRAFT_73140 I
SELMODRAFT_73145 Selaginella moellendorffii SELMODRAFT_73145 I
Solyc03g119800.1 Solanum lycopersicum Solyc03g119800.1 N
PGSC0003DMG400005621 Solanum tuberosum PGSC0003DMG400005621 N
TCM_005425 Theobroma cacao TCM_005425 I
TCM_011632 Theobroma cacao TCM_011632 I
VIT_02s0025g03170 Vitis vinifera VIT_02s0025g03170 N