CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Cucsa.193280
(
Cucumis sativus
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00847 (AP2)
IPR001471
Cucsa.193280
T007051_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cucsa.193280.1
AP2
14
65
HRYVGVRQRPSGRWVSEIKDSLQKVRLWLGTFDTAEEAARAYDDAARALRGS
Links
Other
AP2
family TFs
Other
Cucumis sativus
TFs
133 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cla005054
Citrullus lanatus
Cla005054
N
0.780
TCM_015579
Theobroma cacao
TCM_015579
I
0.749
Ciclev10023360m.g
Citrus clementina
Ciclev10023360m.g
I
0.749
Gorai.008G261800
Gossypium raimondii
Gorai.008G261800
I
0.749
orange1.1g016393m.g
Citrus sinensis
orange1.1g016393m.g
I
0.749
30068.m002623
Ricinus communis
30068.m002623
I
0.743
evm.TU.supercontig_62.63
Carica papaya
evm.TU.supercontig_62.63
I
0.734
PK25269.1
Cannabis sativa
PK25269.1
I
0.733
evm.TU.supercontig_18.194
Carica papaya
evm.TU.supercontig_18.194
I
0.725
GSMUA_Achr3G12350_001
Musa acuminata
GSMUA_Achr3G12350_001
I
0.724
POPTR_0014s07280
Populus trichocarpa
POPTR_0014s07280
I
0.722
PRUPE_ppa022202mg
Prunus persica
PRUPE_ppa022202mg
I
0.722
TCM_005425
Theobroma cacao
TCM_005425
I
0.722
Pm008788
Prunus mume
Pm008788
I
0.722
cassava40212.m1
Manihot esculenta
cassava40212.m1
I
0.722
mgf018851m
Mimulus guttatus
mgf018851m
I
0.722
Ciclev10023764m.g
Citrus clementina
Ciclev10023764m.g
I
0.722
gene16905-v1.0-hybrid
Fragaria vesca
gene16905-v1.0-hybrid
I
0.722
Gorai.008G116800
Gossypium raimondii
Gorai.008G116800
I
0.722
Lus10036556.g
Linum usitatissimum
Lus10036556.g
I
0.722
Lus10041372.g
Linum usitatissimum
Lus10041372.g
I
0.722
MDP0000133476
Malus domestica
MDP0000133476
I
0.722
MDP0000138669
Malus domestica
MDP0000138669
I
0.722
orange1.1g037119m.g
Citrus sinensis
orange1.1g037119m.g
I
0.722
SapurV1A.2432s0010
Salix purpurea
SapurV1A.2432s0010
I
0.722
Si032213m.g
Setaria italica
Si032213m.g
I
0.721
Pavir.Ba01277
Panicum virgatum
Pavir.Ba01277
I
0.721
GLYMA03G01931
Glycine max
GLYMA03G01931
I
0.720
GLYMA07G08542
Glycine max
GLYMA07G08542
I
0.720
MTR_8g032610
Medicago truncatula
MTR_8g032610
I
0.720
Ca_16397
Cicer arietinum
Ca_16397
I
0.720
AMTR_s00069p00132820
Amborella trichopoda
AMTR_s00069p00132820
I
0.719
MTR_2g016730
Medicago truncatula
MTR_2g016730
N
0.719
30174.m008961
Ricinus communis
30174.m008961
I
0.718
POPTR_0001s45740
Populus trichocarpa
POPTR_0001s45740
N
0.716
PRUPE_ppa019500mg
Prunus persica
PRUPE_ppa019500mg
N
0.716
Gorai.004G127900
Gossypium raimondii
Gorai.004G127900
N
0.716
GRMZM2G018138
Zea mays
GRMZM2G018138
I
0.715
Sb02g030350
Sorghum bicolor
Sb02g030350
I
0.715
cassava47343.m1
Manihot esculenta
cassava47343.m1
N
0.715
Lus10008291.g
Linum usitatissimum
Lus10008291.g
N
0.715
OMERI09G12500
Oryza meridionalis
OMERI09G12500
I
0.711
OPUNC09G15300
Oryza punctata
OPUNC09G15300
I
0.711
ORUFI09G18220
Oryza rufipogon
ORUFI09G18220
I
0.711
BGIOSGA031114
Oryza indica
BGIOSGA031114
I
0.709
ONIVA09G17920
Oryza nivara
ONIVA09G17920
I
0.709
cassava28630.m1
Manihot esculenta
cassava28630.m1
I
0.707
GLYMA13G29920
Glycine max
GLYMA13G29920
N
0.706
PGSC0003DMG400017051
Solanum tuberosum
PGSC0003DMG400017051
I
0.706
Solyc01g091760.2
Solanum lycopersicum
Solyc01g091760.2
I
0.706
Ca_25424
Cicer arietinum
Ca_25424
I
0.706
MDP0000127123
Malus domestica
MDP0000127123
N
0.706
GLYMA15G09190
Glycine max
GLYMA15G09190
N
0.705
LjT06B04.30.nd
Lotus japonicus
LjT06B04.30.nd
N
0.705
MTR_4g082345
Medicago truncatula
MTR_4g082345
I
0.704
GLYMA20G03890
Glycine max
GLYMA20G03890
N
0.700
MDP0000316843
Malus domestica
MDP0000316843
N
0.700
Cla021590
Citrullus lanatus
Cla021590
I
0.696
Cucsa.258020
Cucumis sativus
Cucsa.258020
I
0.696
VIT_02s0025g03170
Vitis vinifera
VIT_02s0025g03170
N
0.695
Aquca_013_00424
Aquilegia coerulea
Aquca_013_00424
I
0.695
gene01844-v1.0-hybrid
Fragaria vesca
gene01844-v1.0-hybrid
N
0.695
Eucgr.J01042
Eucalyptus grandis
Eucgr.J01042
N
0.692
LPERR09G12960
Leersia perrieri
LPERR09G12960
I
0.691
OGLUM09G17450
Oryza glumaepatula
OGLUM09G17450
I
0.691
PGSC0003DMG400005621
Solanum tuberosum
PGSC0003DMG400005621
N
0.689
Solyc03g119800.1
Solanum lycopersicum
Solyc03g119800.1
N
0.689
GRMZM2G010100
Zea mays
GRMZM2G010100
I
0.687
MTR_7g011630
Medicago truncatula
MTR_7g011630
I
0.687
Sb01g014810
Sorghum bicolor
Sb01g014810
I
0.687
Si024417m.g
Setaria italica
Si024417m.g
I
0.687
Cla010474
Citrullus lanatus
Cla010474
I
0.687
cassava1773.valid.m1
Manihot esculenta
cassava1773.valid.m1
I
0.687
Cucsa.158080
Cucumis sativus
Cucsa.158080
I
0.687
Aquca_002_00706
Aquilegia coerulea
Aquca_002_00706
I
0.687
Pavir.Cb00448
Panicum virgatum
Pavir.Cb00448
I
0.687
Pavir.Ia01300
Panicum virgatum
Pavir.Ia01300
I
0.687
Pavir.Ib03934
Panicum virgatum
Pavir.Ib03934
I
0.687
Pavir.J28133
Panicum virgatum
Pavir.J28133
I
0.687
Pavir.J28151
Panicum virgatum
Pavir.J28151
I
0.687
Ca_00417
Cicer arietinum
Ca_00417
I
0.686
TCM_011632
Theobroma cacao
TCM_011632
I
0.685
cassava4119.m1
Manihot esculenta
cassava4119.m1
I
0.685
Gorai.008G178900
Gossypium raimondii
Gorai.008G178900
I
0.685
BGIOSGA037681
Oryza indica
BGIOSGA037681
I
0.684
F775_02727
Aegilops tauschii
F775_02727
I
0.684
GLYMA13G05690
Glycine max
GLYMA13G05690
I
0.684
GLYMA19G03120
Glycine max
GLYMA19G03120
I
0.684
GLYMA19G03165
Glycine max
GLYMA19G03165
I
0.684
GRMZM2G039112
Zea mays
GRMZM2G039112
I
0.684
GSMUA_Achr4G28070_001
Musa acuminata
GSMUA_Achr4G28070_001
I
0.684
MLOC_7255
Hordeum vulgare
MLOC_7255
I
0.684
MTR_6g012970
Medicago truncatula
MTR_6g012970
I
0.684
OBART12G17080
Oryza barthii
OBART12G17080
I
0.684
OGLUM12G18720
Oryza glumaepatula
OGLUM12G18720
I
0.684
OMERI11G15200
Oryza meridionalis
OMERI11G15200
I
0.684
ONIVA12G15550
Oryza nivara
ONIVA12G15550
I
0.684
OPUNC12G15550
Oryza punctata
OPUNC12G15550
I
0.684
ORGLA12G0200400
Oryza glaberrima
ORGLA12G0200400
I
0.684
ORUFI12G19000
Oryza rufipogon
ORUFI12G19000
I
0.684
OS12G0582900
Oryza sativa
OS12G0582900
I
0.684
PGSC0003DMG400001343
Solanum tuberosum
PGSC0003DMG400001343
I
0.684
POPTR_0017s12370
Populus trichocarpa
POPTR_0017s12370
I
0.684
PRUPE_ppa025010mg
Prunus persica
PRUPE_ppa025010mg
I
0.684
Sb08g019530
Sorghum bicolor
Sb08g019530
I
0.684
Si038848m.g
Setaria italica
Si038848m.g
I
0.684
TCM_018659
Theobroma cacao
TCM_018659
I
0.684
Traes_5DS_1BDB9837E
Triticum aestivum
Traes_5DS_1BDB9837E
I
0.684
VIT_14s0108g01220
Vitis vinifera
VIT_14s0108g01220
I
0.684
Ca_10494
Cicer arietinum
Ca_10494
I
0.684
Pm015931
Prunus mume
Pm015931
I
0.684
29635.m000461
Ricinus communis
29635.m000461
I
0.684
cassava9303.m1
Manihot esculenta
cassava9303.m1
I
0.684
Ciclev10013796m.g
Citrus clementina
Ciclev10013796m.g
I
0.684
evm.TU.supercontig_14.126
Carica papaya
evm.TU.supercontig_14.126
I
0.684
gene04400-v1.0-hybrid
Fragaria vesca
gene04400-v1.0-hybrid
I
0.684
Gorai.006G013600
Gossypium raimondii
Gorai.006G013600
I
0.684
MDP0000276536
Malus domestica
MDP0000276536
I
0.684
MDP0000551969
Malus domestica
MDP0000551969
I
0.684
orange1.1g046337m.g
Citrus sinensis
orange1.1g046337m.g
I
0.684
SapurV1A.0322s0110
Salix purpurea
SapurV1A.0322s0110
I
0.684
PK13330.1
Cannabis sativa
PK13330.1
I
0.684
OB09G23520
Oryza brachyantha
OB09G23520
I
0.682
29813.m001543
Ricinus communis
29813.m001543
I
0.682
Ciclev10033847m.g
Citrus clementina
Ciclev10033847m.g
I
0.682
Lus10001298.g
Linum usitatissimum
Lus10001298.g
I
0.682
Lus10012703.g
Linum usitatissimum
Lus10012703.g
I
0.682
orange1.1g046190m.g
Citrus sinensis
orange1.1g046190m.g
I
0.682
cassava4942.m1
Manihot esculenta
cassava4942.m1
I
0.680
mgf024137m
Mimulus guttatus
mgf024137m
N
0.679
Lus10036793.g
Linum usitatissimum
Lus10036793.g
I
0.678
Lus10037137.g
Linum usitatissimum
Lus10037137.g
I
0.678
cassava4189.m1
Manihot esculenta
cassava4189.m1
I
0.677