TCM_005402 (Theobroma cacao)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 TCM_005402 T280447_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PC-MYB1
M07110_2.00 		Arabidopsis thaliana
NDWWNTDRCCGTTRN
NYAACGGYHANWWHN		 Dap-seq
OMalley et al.(2016)
MYB3R1_col_a 		0.663 0.759
PC-MYB1
M07111_2.00 		Arabidopsis thaliana
DWHNTDRCCGTTR
YAACGGYHANDWH		 Dap-seq
OMalley et al.(2016)
MYB3R1_colamp_a 		0.663 0.759
Q948S4_TOBAC
M11073_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MYBB_01 		0.663 0.745
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EOX96058 Myb 57 103
EOX96058 Myb 109 155
EOX96058 Myb 161 203

Links

Other Myb/SANT family TFs
Other Theobroma cacao TFs

34 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bcin14g05460 Botrytis cinerea Bcin14g05460 N
EV44_g5834 Erysiphe necator EV44_g5834 N
MBM_00505 Marssonina brunnea MBM_00505 N
OIDMADRAFT_40435 Oidiodendron maius OIDMADRAFT_40435 N
OCS_04571 Ophiocordyceps sinensis OCS_04571 N
SBOR_9003 Sclerotinia borealis SBOR_9003 N