VIT_08s0007g07230 (Vitis vinifera)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 VIT_08s0007g07230 T281975_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q2TCH0_PETHY
M11072_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PH4_01 		0.816 0.925
ATMYB121
M07091_2.00 		Arabidopsis thaliana
NYNWACCTAMYHHH
DDDRKTAGGTWNRN		 Dap-seq
OMalley et al.(2016)
MYB121_col_a 		0.723 0.699
MYB62
M07027_2.00 		Arabidopsis thaliana
NHRCCTAAYTWNHNN
NNDNWARTTAGGYDN		 Dap-seq
OMalley et al.(2016)
MYB62_col_a 		0.703 0.656
MYB62
M07028_2.00 		Arabidopsis thaliana
HNKRCCTAACTHH
DDAGTTAGGYMND		 Dap-seq
OMalley et al.(2016)
MYB62_colamp_a 		0.703 0.656
MYB3
M02288_2.00 		Arabidopsis thaliana
NNYACCTACCN
NGGTAGGTRNN		 PBM
Weirauch et al.(2014)
pTH7125 		0.679 0.699
MYB116
M07014_2.00 		Arabidopsis thaliana
NRCCTAAYTWNWNNN
NNNWNWARTTAGGYN		 Dap-seq
OMalley et al.(2016)
MYB116_col_a 		0.662 0.624
MYB116
M07015_2.00 		Arabidopsis thaliana
HNTRCCTAACTHH
DDAGTTAGGYAND		 Dap-seq
OMalley et al.(2016)
MYB116_colamp_a 		0.662 0.624
MYB4
M02303_2.00 		Arabidopsis thaliana
YACCWACY
RGTWGGTR		 PBM
Weirauch et al.(2014)
pTH7075 		0.662 0.720
MYB4
M07115_2.00 		Arabidopsis thaliana
NYYACCWAMHWHNDD
HHNDWDKTWGGTRRN		 Dap-seq
OMalley et al.(2016)
MYB4_col200_a 		0.662 0.720
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
VIT_08s0007g07230.t01 Myb 22 69
VIT_08s0007g07230.t01 Myb 75 120

Links

Other Myb/SANT family TFs
Other Vitis vinifera TFs

670 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ANAC104 Arabidopsis lyrata fgenesh2_kg.8__2481__AT5G64530.1 N
NAC104 Arabidopsis thaliana AT5G64530 N
Bostr.0568s0345 Boechera stricta Bostr.0568s0345 N
Bo2g166280 Brassica oleracea Bo2g166280 N
Bo3g101220 Brassica oleracea Bo3g101220 N
Bo9g018140 Brassica oleracea Bo9g018140 N
Bra024306 Brassica rapa Bra024306 N
Bra031915 Brassica rapa Bra031915 N
Bra037779 Brassica rapa Bra037779 N
Cagra.0248s0135 Capsella grandiflora Cagra.0248s0135 N
Carubv10027198m.g Capsella rubella Carubv10027198m.g N
Cla009592 Citrullus lanatus Cla009592 N
Ciclev10002538m.g Citrus clementina Ciclev10002538m.g N
orange1.1g029016m.g Citrus sinensis orange1.1g029016m.g N
Cucsa.345830 Cucumis sativus Cucsa.345830 N
Eucgr.I02695 Eucalyptus grandis Eucgr.I02695 N
Thhalv10004805m.g Eutrema salsugineum Thhalv10004805m.g N
Gorai.013G063500 Gossypium raimondii Gorai.013G063500 N
Gorai.008G014700 Gossypium raimondii Gorai.008G014700 N
Lus10000206.g Linum usitatissimum Lus10000206.g N
Lus10010747.g Linum usitatissimum Lus10010747.g N
Lus10035647.g Linum usitatissimum Lus10035647.g N
Lus10035648.g Linum usitatissimum Lus10035648.g N
chr4.CM0337.760.nc Lotus japonicus chr4.CM0337.760.nc N
MDP0000240094 Malus domestica MDP0000240094 N
MDP0000250487 Malus domestica MDP0000250487 N
cassava1502.valid.m1 Manihot esculenta cassava1502.valid.m1 N
POPTR_0003s01720 Populus trichocarpa POPTR_0003s01720 N
POPTR_0001s21440 Populus trichocarpa POPTR_0001s21440 N
Pm004078 Prunus mume Pm004078 N
PRUPE_ppa019508mg Prunus persica PRUPE_ppa019508mg N
Solyc01g104900.2 Solanum lycopersicum Solyc01g104900.2 N
PGSC0003DMG400029741 Solanum tuberosum PGSC0003DMG400029741 N
TCM_007543 Theobroma cacao TCM_007543 I
VIT_04s0044g01500 Vitis vinifera VIT_04s0044g01500 N