VIT_11s0016g03750 (Vitis vinifera)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 VIT_11s0016g03750 T282007_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q948S5_TOBAC
M11074_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MYBA2_01 		0.833 0.928
PC-MYB1
M07110_2.00 		Arabidopsis thaliana
NDWWNTDRCCGTTRN
NYAACGGYHANWWHN		 Dap-seq
OMalley et al.(2016)
MYB3R1_col_a 		0.816 0.885
PC-MYB1
M07111_2.00 		Arabidopsis thaliana
DWHNTDRCCGTTR
YAACGGYHANDWH		 Dap-seq
OMalley et al.(2016)
MYB3R1_colamp_a 		0.816 0.885
PK12011.1
M01279_2.00 		Cannabis sativa
HAACGGHHNN
NNDDCCGTTD		 PBM
Lambert et al.(2019)
pTH11423 		0.793 0.899
MYB3R4
M07125_2.00 		Arabidopsis thaliana
NDWWNTDRCCGTTRN
NYAACGGYHANWWHN		 Dap-seq
OMalley et al.(2016)
MYB3R4_col_a 		0.780 0.856
Q948S4_TOBAC
M11073_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MYBB_01 		0.704 0.763
Q948S6_TOBAC
M11075_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MYBA1_01 		0.668 0.813
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
VIT_11s0016g03750.t01 Myb 45 91
VIT_11s0016g03750.t01 Myb 97 143
VIT_11s0016g03750.t01 Myb 149 193

Links

Other Myb/SANT family TFs
Other Vitis vinifera TFs

162 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
nAv.1.0.1.g04749 Acanthocheilonema viteae nAv.1.0.1.g04749 I
ACYPI001696 Acyrthosiphon pisum ACYPI001696 I
AAEL002769 Aedes aegypti AAEL002769 N
ANCDUO_20174 Ancylostoma duodenale ANCDUO_20174 I
AARA009757 Anopheles arabiensis AARA009757 I
AATE019368 Anopheles atroparvus AATE019368 N
ACHR007729 Anopheles christyi ACHR007729 I
ACOM033416 Anopheles coluzzii ACOM033416 N
ACUA003826 Anopheles culicifacies ACUA003826 I
AEPI001687 Anopheles epiroticus AEPI001687 I
AFAF012033 Anopheles farauti AFAF012033 N
AGAP004052 Anopheles gambiae AGAP004052 N
AMEC020934 Anopheles melas AMEC020934 N
AMEM000031 Anopheles merus AMEM000031 N
AMIN002618 Anopheles minimus AMIN002618 I
AQUA008561 Anopheles quadriannulatus AQUA008561 I
ASTEI07078 Anopheles stephensi ASTEI07078 I
ASU_00242 Ascaris suum ASU_00242 I
Bm5024 Brugia malayi Bm5024 I
CBN10125 Caenorhabditis brenneri CBN10125 I
CBG22984 Caenorhabditis briggsae CBG22984 I
pros-1 Caenorhabditis elegans WBGene00000448 D
CJA12444 Caenorhabditis japonica CJA12444 I
Cflo_00868--XP_392355.3_APIME Camponotus floridanus Cflo_00868--XP_392355.3_APIME I
CLEC000910 Cimex lectularius CLEC000910 N
KGM_10139 Danaus plexippus KGM_10139 N
YQE_10516 Dendroctonus ponderosae YQE_10516 I
nDi.2.2.2.g11480 Dirofilaria immitis nDi.2.2.2.g11480 N
DME_0000841401 Dracunculus medinensis DME_0000841401 I
GF16857 Drosophila ananassae FBgn0093877 N
GG18089 Drosophila erecta FBgn0110306 N
GH21437 Drosophila grimshawi FBgn0128899 N
pros Drosophila melanogaster FBgn0004595 N
GI22696 Drosophila mojavensis FBgn0145423 N
GA14403 Drosophila pseudoobscura FBgn0074431 N
GM23939 Drosophila sechellia FBgn0178804 N
pros Drosophila simulans FBgn0025030 N
pros Drosophila virilis FBgn0028753 N
GK11290 Drosophila willistoni FBgn0213301 N
GE26090 Drosophila yakuba FBgn0243130 N
EVEC_0001110501 Enterobius vermicularis EVEC_0001110501 I
HCOI01824000 Haemonchus contortus HCOI01824000 I
ISCW008733 Ixodes scapularis ISCW008733 N
LDEC004085 Leptinotarsa decemlineata LDEC004085 N
nLs.2.1.2.g05095 Litomosoides sigmodontis nLs.2.1.2.g05095 I
ENSMEUG00000013465 Macropus eugenii ENSMEUG00000013465 I
maker-nMf.1.1.scaf00605-augustus-gene-0.8 Meloidogyne floridensis maker-nMf.1.1.scaf00605-augustus-gene-0.8 N
Minc12662 Meloidogyne incognita Minc12662 N
MDOA008728 Musca domestica MDOA008728 N
NV15108 Nasonia vitripennis NV15108 N
NBR_0000066801 Nippostrongylus brasiliensis NBR_0000066801 I
WBGene00244521 Onchocerca volvulus WBGene00244521 I
PTRK_0001568700 Parastrongyloides trichosuri PTRK_0001568700 I
PHUM334550 Pediculus humanus PHUM334550 I
RSKR_0000081800 Rhabditophanes kr3021 RSKR_0000081800 N
SINV18378 Solenopsis invicta SINV18378 I
L596_g9976 Steinernema carpocapsae L596_g9976 I
L889_g22574 Steinernema feltiae L889_g22574 I
L893_g28279 Steinernema glaseri L893_g28279 I
L898_g8569 Steinernema monticolum L898_g8569 I
L892_g25141 Steinernema scapterisci L892_g25141 I
SMAR007154 Strigamia maritima SMAR007154 N
SPAL_0001624500 Strongyloides papillosus SPAL_0001624500 I
SSTP_0000359900 Strongyloides stercoralis SSTP_0000359900 I
tetur02g12740 Tetranychus urticae tetur02g12740 N
TC010596 Tribolium castaneum TC010596 N
EFV53283 Trichinella spiralis EFV53283 I
TMUE_s0183000500 Trichuris muris TMUE_s0183000500 I
D918_02805 Trichuris suis D918_02805 I
TTRE_0000134301 Trichuris trichiura TTRE_0000134301 I