Ca_07482 (Cicer arietinum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Ca_07482 T282970_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB98
M02301_2.00 		Arabidopsis thaliana
NNGTAACGKMN
NKMCGTTACNN		 PBM
Weirauch et al.(2014)
pTH8148 		0.749 0.839
MYB98
M07108_2.00 		Arabidopsis thaliana
DWWWHGTAACGKWHD
HDWMCGTTACDWWWH		 Dap-seq
OMalley et al.(2016)
MYB98_col_a 		0.749 0.839
MYB118
M07087_2.00 		Arabidopsis thaliana
DHWDHRDMCGTTACDWW
WWHGTAACGKHYDHWDH		 Dap-seq
OMalley et al.(2016)
MYB118_col_a 		0.668 0.731
MYB118
M07088_2.00 		Arabidopsis thaliana
DWWWYGTAACGKHYR
YRDMCGTTACRWWWH		 Dap-seq
OMalley et al.(2016)
MYB118_colamp_a 		0.668 0.731
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ca_07482 Myb 19 65
Ca_07482 Myb 71 116

Links

Other Myb/SANT family TFs
Other Cicer arietinum TFs

109 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bostr.23794s0389 Boechera stricta Bostr.23794s0389 N
PK07211.1 Cannabis sativa PK07211.1 N
Cagra.0666s0044 Capsella grandiflora Cagra.0666s0044 N
Carubv10024894m.g Capsella rubella Carubv10024894m.g N
evm.TU.supercontig_92.112 Carica papaya evm.TU.supercontig_92.112 N
Ciclev10011603m.g Citrus clementina Ciclev10011603m.g N
orange1.1g011420m.g Citrus sinensis orange1.1g011420m.g N
Eucgr.K01251 Eucalyptus grandis Eucgr.K01251 N
Thhalv10016738m.g Eutrema salsugineum Thhalv10016738m.g N