gene08006-v1.0-hybrid (Fragaria vesca)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 gene08006-v1.0-hybrid T287262_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB118
M07087_2.00 		Arabidopsis thaliana
DHWDHRDMCGTTACDWW
WWHGTAACGKHYDHWDH		 Dap-seq
OMalley et al.(2016)
MYB118_col_a 		0.667 0.720
MYB118
M07088_2.00 		Arabidopsis thaliana
DWWWYGTAACGKHYR
YRDMCGTTACRWWWH		 Dap-seq
OMalley et al.(2016)
MYB118_colamp_a 		0.667 0.720
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
mrna08006.1-v1.0-hybrid Myb 149 195
mrna08006.1-v1.0-hybrid Myb 201 246

Links

Other Myb/SANT family TFs
Other Fragaria vesca TFs

141 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACRE_024280 Acremonium chrysogenum ACRE_024280 I
ACRE_065310 Acremonium chrysogenum ACRE_065310 I
BBA_04574 Beauveria bassiana BBA_04574 I
A1O1_05262 Capronia coronata A1O1_05262 I
A1O3_09505 Capronia epimyces A1O3_09505 I
CHGG_08120 Chaetomium globosum CHGG_08120 I
CTHT_0001980 Chaetomium thermophilum CTHT_0001980 I
CPUR_03952 Claviceps purpurea CPUR_03952 I
CFIO01_04298 Colletotrichum fioriniae CFIO01_04298 I
CGGC5_13803 Colletotrichum gloeosporioides CGGC5_13803 I
GLRG_10304 Colletotrichum graminicola GLRG_10304 I
CH063_01773 Colletotrichum higginsianum CH063_01773 I
Cob_11656 Colletotrichum orbiculare Cob_11656 I
CSUB01_10846 Colletotrichum sublineola CSUB01_10846 I
CCM_05172 Cordyceps militaris CCM_05172 I
fgenesh1_pm.C_scaffold_2000244 Cryphonectria parasitica fgenesh1_pm.C_scaffold_2000244 I
H072_643 Dactylellina haptotyla H072_643 N
PV11_01466 Exophiala sideris PV11_01466 N
PV08_05947 Exophiala spinifera PV08_05947 I
PV05_05964 Exophiala xenobiotica PV05_05964 I
FFUJ_00629 Fusarium fujikuroi FFUJ_00629 I
FGRRES_00967 Fusarium graminearum FGRRES_00967 I
FOXG_00941 Fusarium oxysporum FOXG_00941 I
FPSE_01459 Fusarium pseudograminearum FPSE_01459 I
NechaG75163 Fusarium solani NechaG75163 I
FVEG_00574 Fusarium verticillioides FVEG_00574 I
GGTG_10910 Gaeumannomyces graminis GGTG_10910 I
CMQ_3833 Grosmannia clavigera CMQ_3833 I
MGG_16161 Magnaporthe oryzae MGG_16161 I
MAC_09429 Metarhizium acridum MAC_09429 I
MAM_03975 Metarhizium album MAM_03975 I
MANI_008098 Metarhizium anisopliae MANI_008098 I
MBR_02161 Metarhizium brunneum MBR_02161 I
MGU_04444 Metarhizium guizhouense MGU_04444 I
MAJ_00507 Metarhizium majus MAJ_00507 I
X797_000152 Metarhizium robertsii X797_000152 I
MYCTH_2311613 Myceliophthora thermophila MYCTH_2311613 I
fgenesh1_pg.sca_1_chr1_3_0000774 Nectria haematococca fgenesh1_pg.sca_1_chr1_3_0000774 I
NCU03417 Neurospora crassa NCU03417 D
estExt_Genewise1Plus.C_160104 Neurospora discreta estExt_Genewise1Plus.C_160104 I
NEUTE1DRAFT_123378 Neurospora tetrasperma NEUTE1DRAFT_123378 I
OCS_03653 Ophiocordyceps sinensis OCS_03653 I
PDE_06888 Penicillium oxalicum PDE_06888 N
PFICI_09084 Pestalotiopsis fici PFICI_09084 N
PODANS_3_6090 Podospora anserina PODANS_3_6090 I
V499_00022 Pseudogymnoascus pannorum V499_00022 I
Z518_09480 Rhinocladiella mackenziei Z518_09480 I
SAPIO_CDS0891 Scedosporium apiospermum SAPIO_CDS0891 N
SMAC_08866 Sordaria macrospora SMAC_08866 I
SEPMUDRAFT_161432 Sphaerulina musiva SEPMUDRAFT_161432 I
SPBR_05575 Sporothrix brasiliensis SPBR_05575 I
HMPREF1624_04479 Sporothrix schenckii HMPREF1624_04479 I
S40288_03199 Stachybotrys chartarum S40288_03199 I
S40285_02170 Stachybotrys chlorohalonata S40285_02170 I
THITE_2123319 Thielavia terrestris THITE_2123319 I
UCRPA7_8449 Togninia minima UCRPA7_8449 I
VHEMI10654 Torrubiella hemipterigena VHEMI10654 I
TRIATDRAFT_162437 Trichoderma atroviride TRIATDRAFT_162437 I
TRIREDRAFT_76039 Trichoderma reesei TRIREDRAFT_76039 I
TRIVIDRAFT_80282 Trichoderma virens TRIVIDRAFT_80282 I
UV8b_4907 Ustilaginoidea virens UV8b_4907 I
VDAG_01994 Verticillium dahliae VDAG_01994 I