Gorai.009G098300 (Gossypium raimondii)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Gorai.009G098300 T287709_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK21687.1
M01282_2.00 		Cannabis sativa
HWAAACCYH
DRGGTTTWD		 PBM
Lambert et al.(2019)
pTH11299 		0.854 0.936
TRP2
M07092_2.00 		Arabidopsis thaliana
AAACCCTAAACCCTAAACCC
GGGTTTAGGGTTTAGGGTTT		 Dap-seq
OMalley et al.(2016)
TRP2_col_a 		0.846 0.915
TRP2
M07093_2.00 		Arabidopsis thaliana
AAACCCTAAACCCTAAACCCT
AGGGTTTAGGGTTTAGGGTTT		 Dap-seq
OMalley et al.(2016)
TRP2_colamp_a 		0.846 0.915
TRP1
M07148_2.00 		Arabidopsis thaliana
AAACCCTAAACCCTAAACCCTAA
TTAGGGTTTAGGGTTTAGGGTTT		 Dap-seq
OMalley et al.(2016)
TRP1_col 		0.836 0.915
TRP5
M01266_2.00 		Arabidopsis thaliana
NHWAAACCYH
DRGGTTTWDN		 PBM
Lambert et al.(2019)
pTH9963 		0.794 0.915
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.009G098300.1 Myb 583 633
Gorai.009G098300.2 Myb 581 631
Gorai.009G098300.3 Myb 583 633
Gorai.009G098300.4 Myb 583 613
Gorai.009G098300.5 Myb 583 633

Links

Other Myb/SANT family TFs
Other Gossypium raimondii TFs

205 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000003503 Ailuropoda melanoleuca ENSAMEG00000003503 I
ENSAMEG00000010612 Ailuropoda melanoleuca ENSAMEG00000010612 I
ENSAMEG00000017162 Ailuropoda melanoleuca ENSAMEG00000017162 I
Alligator_sinensis_CCG017304.1 Alligator sinensis Alligator_sinensis_CCG017304.1 I
Alligator_sinensis_CCG017823.1 Alligator sinensis Alligator_sinensis_CCG017823.1 I
ENSAPLG00000001939 Anas platyrhynchos ENSAPLG00000001939 I
ENSAPLG00000011135 Anas platyrhynchos ENSAPLG00000011135 I
TCF4 Anolis carolinensis ENSACAG00000008863 I
TCF12 Anolis carolinensis ENSACAG00000014277 I
ENSACAG00000027602 Anolis carolinensis ENSACAG00000027602 I
Afo_R000660 Aptenodytes forsteri Afo_R000660 I
Afo_R010055 Aptenodytes forsteri Afo_R010055 I
Afo_R014990 Aptenodytes forsteri Afo_R014990 I
ENSAMXG00000006548 Astyanax mexicanus ENSAMXG00000006548 I
ENSAMXG00000009833 Astyanax mexicanus ENSAMXG00000009833 I
ENSAMXG00000014804 Astyanax mexicanus ENSAMXG00000014804 I
ENSAMXG00000017947 Astyanax mexicanus ENSAMXG00000017947 I
ENSBTAP00000028599-D1 Bos grunniens ENSBTAP00000028599-D1 I
ENSBTAP00000048638-D1 Bos grunniens ENSBTAP00000048638-D1 I
ENSP00000381382-D1 Bos grunniens ENSP00000381382-D1 I
TCF12 Bos taurus ENSBTAG00000002586 I
TCF3 Bos taurus ENSBTAG00000008695 I
TCF4 Bos taurus ENSBTAG00000016462 I
Brh_R007211 Buceros rhinoceros Brh_R007211 I
TCF4 Callithrix jacchus ENSCJAG00000004038 I
TCF3 Callithrix jacchus ENSCJAG00000004642 I
Aan_R011701 Calypte anna Aan_R011701 I
Aan_R011985 Calypte anna Aan_R011985 I
TCF4 Canis familiaris ENSCAFG00000000140 I
TCF12 Canis familiaris ENSCAFG00000016200 I
TCF12 Cavia porcellus ENSCPOG00000009153 I
TCF3 Cavia porcellus ENSCPOG00000023586 I
Cmyd_10006705 Chelonia mydas Cmyd_10006705 I
Cmyd_10006706 Chelonia mydas Cmyd_10006706 I
Cmyd_10020160 Chelonia mydas Cmyd_10020160 I
ENSCSAG00000011901 Chlorocebus sabaeus ENSCSAG00000011901 I
ENSCSAG00000018141 Chlorocebus sabaeus ENSCSAG00000018141 I
TCF4 Choloepus hoffmanni ENSCHOG00000000331 I
TCF12 Choloepus hoffmanni ENSCHOG00000003168 I
tcf12 Danio rerio ENSDARG00000004714 I
tcf3a Danio rerio ENSDARG00000005915 I
tcf3b Danio rerio ENSDARG00000099999 I
ENSDNOG00000013859 Dasypus novemcinctus ENSDNOG00000013859 I
ENSDNOG00000042880 Dasypus novemcinctus ENSDNOG00000042880 I
Tcf3 Dipodomys ordii ENSDORG00000004745 I
Tcf4 Dipodomys ordii ENSDORG00000012697 I
TCF3 Echinops telfairi ENSETEG00000015388 I
TCF12 Equus caballus ENSECAG00000011678 I
TCF4 Equus caballus ENSECAG00000017265 I
TCF4 Erinaceus europaeus ENSEEUG00000000134 I
TCF12 Erinaceus europaeus ENSEEUG00000002182 I
TCF4 Felis catus ENSFCAG00000014682 I
TCF3 Felis catus ENSFCAG00000023514 I
TCF12 Felis catus ENSFCAG00000031674 I
ENSFALG00000011409 Ficedula albicollis ENSFALG00000011409 I
ENSFALG00000012146 Ficedula albicollis ENSFALG00000012146 I
ENSGMOG00000004189 Gadus morhua ENSGMOG00000004189 I
ENSGMOG00000008934 Gadus morhua ENSGMOG00000008934 I
ENSGMOG00000012207 Gadus morhua ENSGMOG00000012207 I
ENSGMOG00000015710 Gadus morhua ENSGMOG00000015710 I
ENSGMOG00000018104 Gadus morhua ENSGMOG00000018104 I
TCF3 Gallus gallus ENSGALG00000001093 I
TCF12 Gallus gallus ENSGALG00000004304 I
ENSGACG00000000628 Gasterosteus aculeatus ENSGACG00000000628 I
TCF12 Gasterosteus aculeatus ENSGACG00000006101 I
tcf3b Gasterosteus aculeatus ENSGACG00000012737 I
tcf3a Gasterosteus aculeatus ENSGACG00000015282 I
tcf12 Gasterosteus aculeatus ENSGACG00000015831 I
Gfo_R004309 Geospiza fortis Gfo_R004309 I
Gfo_R007595 Geospiza fortis Gfo_R007595 I
TCF3 Gorilla gorilla ENSGGOG00000003667 I
TCF12 Gorilla gorilla ENSGGOG00000008166 I
TCF4 Gorilla gorilla ENSGGOG00000016297 I
TCF3 Homo sapiens ENSG00000071564 D
TCF12 Homo sapiens ENSG00000140262 D
TCF4 Homo sapiens ENSG00000196628 D
XP_002153906.1 Hydra magnipapillata XP_002153906.1 I
ENSSTOG00000001523 Ictidomys tridecemlineatus ENSSTOG00000001523 I
ENSSTOG00000005134 Ictidomys tridecemlineatus ENSSTOG00000005134 I
ENSSTOG00000010293 Ictidomys tridecemlineatus ENSSTOG00000010293 I
ENSLACG00000003485 Latimeria chalumnae ENSLACG00000003485 I
ENSLACG00000014145 Latimeria chalumnae ENSLACG00000014145 I
ENSLACG00000016589 Latimeria chalumnae ENSLACG00000016589 I
ENSLOCG00000003538 Lepisosteus oculatus ENSLOCG00000003538 I
ENSLOCG00000006013 Lepisosteus oculatus ENSLOCG00000006013 I
ENSLOCG00000013539 Lepisosteus oculatus ENSLOCG00000013539 I
TCF12 Loxodonta africana ENSLAFG00000010546 I
TCF4 Loxodonta africana ENSLAFG00000013449 I
TCF3 Loxodonta africana ENSLAFG00000026277 I
ENSP00000331057 Macaca fascicularis ENSP00000331057 I
ENSP00000378813 Macaca fascicularis ENSP00000378813 I
ENSP00000381382 Macaca fascicularis ENSP00000381382 I
TCF12 Macaca mulatta ENSMMUG00000004091 I
TCF3 Macaca mulatta ENSMMUG00000009017 I
TCF4 Macaca mulatta ENSMMUG00000012001 I
ENSMEUG00000003794 Macropus eugenii ENSMEUG00000003794 I
ENSMEUG00000014058 Macropus eugenii ENSMEUG00000014058 I
TCF3 Meleagris gallopavo ENSMGAG00000002388 I
ENSMGAG00000005667 Meleagris gallopavo ENSMGAG00000005667 I
TCF12 Microcebus murinus ENSMICG00000009110 I
TCF4 Microcebus murinus ENSMICG00000012305 I
TCF3 Monodelphis domestica ENSMODG00000004143 I
TCF12 Monodelphis domestica ENSMODG00000008311 I
TCF4 Monodelphis domestica ENSMODG00000020455 I
ENSMPUG00000004438 Mustela putorius furo ENSMPUG00000004438 I
ENSMPUG00000008024 Mustela putorius furo ENSMPUG00000008024 I
ENSMPUG00000016460 Mustela putorius furo ENSMPUG00000016460 I
Tcf3 Mus musculus ENSMUSG00000020167 D
Tcf12 Mus musculus ENSMUSG00000032228 D
Tcf4 Mus musculus ENSMUSG00000053477 D
Myotis_brandtii_Tcf12_10010436 Myotis brandtii Myotis_brandtii_Tcf12_10010436 I
Myotis_brandtii_Tcf4_10017301 Myotis brandtii Myotis_brandtii_Tcf4_10017301 I
TCF12 Myotis lucifugus ENSMLUG00000006205 I
TCF3 Myotis lucifugus ENSMLUG00000011221 I
ENSMLUG00000012927 Myotis lucifugus ENSMLUG00000012927 I
ENSNLEG00000001742 Nomascus leucogenys ENSNLEG00000001742 I
ENSNLEG00000006707 Nomascus leucogenys ENSNLEG00000006707 I
ENSNLEG00000007981 Nomascus leucogenys ENSNLEG00000007981 I
Ocbimv22006241m.g Octopus bimaculoides Ocbimv22006241m.g I
SNAPOd2T00003591001 Oikopleura dioica SNAPOd2T00003591001 I
Ogr01317 Ophisaurus gracilis Ogr01317 I
Ogr01318 Ophisaurus gracilis Ogr01318 I
Ogr02020 Ophisaurus gracilis Ogr02020 I
Ogr11405 Ophisaurus gracilis Ogr11405 I
ENSONIG00000004816 Oreochromis niloticus ENSONIG00000004816 I
ENSONIG00000005794 Oreochromis niloticus ENSONIG00000005794 I
ENSONIG00000008337 Oreochromis niloticus ENSONIG00000008337 I
ENSONIG00000010206 Oreochromis niloticus ENSONIG00000010206 I
ENSONIG00000012720 Oreochromis niloticus ENSONIG00000012720 I
TCF4 Ornithorhynchus anatinus ENSOANG00000003082 I
TCF12 Ornithorhynchus anatinus ENSOANG00000009462 I
TCF3 Ornithorhynchus anatinus ENSOANG00000014335 I
TCF4 Oryctolagus cuniculus ENSOCUG00000002669 I
TCF12 Oryctolagus cuniculus ENSOCUG00000017812 I
tcf3b Oryzias latipes ENSORLG00000004923 I
TCF12 Oryzias latipes ENSORLG00000005330 I
tcf12 Oryzias latipes ENSORLG00000008508 I
ENSORLG00000015062 Oryzias latipes ENSORLG00000015062 I
TCF3 Otolemur garnettii ENSOGAG00000003587 I
ENSOGAG00000005735 Otolemur garnettii ENSOGAG00000005735 I
TCF12 Otolemur garnettii ENSOGAG00000006485 I
ENSOARG00000005018 Ovis aries ENSOARG00000005018 I
ENSOARG00000012495 Ovis aries ENSOARG00000012495 I
ENSOARG00000020872 Ovis aries ENSOARG00000020872 I
TCF12 Pan troglodytes ENSPTRG00000007109 I
TCF4 Pan troglodytes ENSPTRG00000010040 I
TCF3 Pan troglodytes ENSPTRG00000010211 I
ENSPANG00000016063 Papio anubis ENSPANG00000016063 I
ENSPANG00000017265 Papio anubis ENSPANG00000017265 I
ENSPSIG00000004202 Pelodiscus sinensis ENSPSIG00000004202 I
ENSPSIG00000011880 Pelodiscus sinensis ENSPSIG00000011880 I
ENSPSIG00000014469 Pelodiscus sinensis ENSPSIG00000014469 I
ENSPMAG00000000958 Petromyzon marinus ENSPMAG00000000958 I
ENSPFOG00000001904 Poecilia formosa ENSPFOG00000001904 I
ENSPFOG00000004140 Poecilia formosa ENSPFOG00000004140 I
ENSPFOG00000009937 Poecilia formosa ENSPFOG00000009937 I
ENSPFOG00000024249 Poecilia formosa ENSPFOG00000024249 I
Pvit_09822 Pogona vitticeps Pvit_09822 I
Pvit_17395 Pogona vitticeps Pvit_17395 I
Pvit_19114 Pogona vitticeps Pvit_19114 I
ENSPPYG00000006505 Pongo abelii ENSPPYG00000006505 I
ENSPPYG00000009175 Pongo abelii ENSPPYG00000009175 I
ENSPPYG00000009327 Pongo abelii ENSPPYG00000009327 I
TCF4 Pteropus vampyrus ENSPVAG00000002074 I
TCF12 Pteropus vampyrus ENSPVAG00000006184 I
TCF3 Pteropus vampyrus ENSPVAG00000014587 I
Tcf4 Rattus norvegicus ENSRNOG00000012405 I
Tcf3 Rattus norvegicus ENSRNOG00000051499 I
Tcf12 Rattus norvegicus ENSRNOG00000057754 I
Sakowv30044282m.g Saccoglossus kowalevskii Sakowv30044282m.g I
ENSSHAG00000013735 Sarcophilus harrisii ENSSHAG00000013735 I
ENSSHAG00000014955 Sarcophilus harrisii ENSSHAG00000014955 I
ENSSHAG00000015935 Sarcophilus harrisii ENSSHAG00000015935 I
TCF4 Sorex araneus ENSSARG00000001666 I
TCF12 Sorex araneus ENSSARG00000013798 I
SMAR008523 Strigamia maritima SMAR008523 I
SPU_016343 Strongylocentrotus purpuratus SPU_016343 I
TCF4 Sus scrofa ENSSSCG00000004535 I
TCF3 Sus scrofa ENSSSCG00000013437 I
TCF3 Taeniopygia guttata ENSTGUG00000000208 I
TCF12 Taeniopygia guttata ENSTGUG00000006270 I
ENSTRUG00000002569 Takifugu rubripes ENSTRUG00000002569 I
TCF12 Takifugu rubripes ENSTRUG00000008110 I
tcf3a Takifugu rubripes ENSTRUG00000008147 I
tcf12 Takifugu rubripes ENSTRUG00000017855 I
tcf3b Takifugu rubripes ENSTRUG00000017901 I
ENSTSYG00000009264 Tarsius syrichta ENSTSYG00000009264 I
ENSTSYG00000009542 Tarsius syrichta ENSTSYG00000009542 I
tetur02g08700 Tetranychus urticae tetur02g08700 I
tcf12 Tetraodon nigroviridis ENSTNIG00000009326 I
ENSTNIG00000010330 Tetraodon nigroviridis ENSTNIG00000010330 I
ENSTNIG00000013705 Tetraodon nigroviridis ENSTNIG00000013705 I
tcf3a Tetraodon nigroviridis ENSTNIG00000015322 I
TCF12 Tupaia belangeri ENSTBEG00000002192 I
TCF4 Tupaia belangeri ENSTBEG00000015498 I
TCF12 Tursiops truncatus ENSTTRG00000010817 I
TCF4 Tursiops truncatus ENSTTRG00000011542 I
TCF12 Vicugna pacos ENSVPAG00000006545 I
AAA92048 Xenopus laevis AAA92048 I
AAA92050 Xenopus laevis AAA92050 I
AAH44064 Xenopus laevis AAH44064 I
tcf4.S Xenopus laevis XB-GENE-1011632 I
tcf12 Xenopus laevis XB-GENE-5799694 I
tcf12.L Xenopus laevis XB-GENE-5799717 I
tcf3.L Xenopus laevis XB-GENE-865159 I
tcf4 Xenopus tropicalis XB-GENE-1011628 I
tcf3 Xenopus tropicalis XB-GENE-478265 I
tcf12 Xenopus tropicalis XB-GENE-5799694 I
ENSXMAG00000006665 Xiphophorus maculatus ENSXMAG00000006665 I
ENSXMAG00000011822 Xiphophorus maculatus ENSXMAG00000011822 I
ENSXMAG00000012718 Xiphophorus maculatus ENSXMAG00000012718 I
ENSXMAG00000014303 Xiphophorus maculatus ENSXMAG00000014303 I