SapurV1A.0162s0390 (Salix purpurea)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 SapurV1A.0162s0390 T289625_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LHY
M06997_2.00 		Arabidopsis thaliana
NWAAATATCT
AGATATTTWN		 Dap-seq
OMalley et al.(2016)
LHY1_col_a 		0.891 0.935
LHY
M06998_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
LHY1_colamp_a 		0.891 0.935
OS08G0157600
M02330_2.00 		Oryza sativa
DNRTATCHN
NDGATAYNH		 PBM
Weirauch et al.(2014)
pTH7793 		0.881 0.935
CCA1
M00875_2.00 		Arabidopsis thaliana
NDNRWATCN
NGATWYNHN		 PBM
Franco-Zorrilla et al.(2014)
CCA1 		0.836 0.870
CCA1
M11039_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CCA1_Q5 		0.836 0.870
RVE7
M01069_2.00 		Arabidopsis thaliana
NDHRWATCNN
NNGATWYDHN		 PBM
Sullivan et al.(2014)
pTH7081 		0.800 0.826
RVE7
M02286_2.00 		Arabidopsis thaliana
NDARTATCH
DGATAYTHN		 PBM
Weirauch et al.(2014)
pTH7277 		0.800 0.826
RVE7L
M07071_2.00 		Arabidopsis thaliana
NNNNWAAATATCWNN
NNWGATATTTWNNNN		 Dap-seq
OMalley et al.(2016)
AT3G10113_col_a 		0.800 0.826
RVE7
M07008_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
EPR1_colamp_a 		0.800 0.826
RVE7
M07009_2.00 		Arabidopsis thaliana
NWAAATATCTHN
NDAGATATTTWN		 Dap-seq
OMalley et al.(2016)
EPR1_col 		0.800 0.826
RVE1
M00879_2.00 		Arabidopsis thaliana
AAATATCT
AGATATTT		 PBM
Franco-Zorrilla et al.(2014)
RVE1 		0.767 0.848
RVE1
M07128_2.00 		Arabidopsis thaliana
NNNWAAATATCTNN
NNAGATATTTWNNN		 Dap-seq
OMalley et al.(2016)
RVE1_col_a 		0.767 0.848
RVE1
M07129_2.00 		Arabidopsis thaliana
NNWAATATCW
WGATATTWNN		 Dap-seq
OMalley et al.(2016)
RVE1_colamp_a 		0.767 0.848
PK08316.1
M02350_2.00 		Cannabis sativa
NNNRWATCNN
NNGATWYNNN		 PBM
Weirauch et al.(2014)
pTH9488 		0.766 0.826
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SapurV1A.0162s0390.1.p Myb 24 69
SapurV1A.0162s0390.2.p Myb 24 69
SapurV1A.0162s0390.3.p Myb 24 69
SapurV1A.0162s0390.4.p Myb 24 69
SapurV1A.0162s0390.5.p Myb 24 69
SapurV1A.0162s0390.6.p Myb 24 69

Links

Other Myb/SANT family TFs
Other Salix purpurea TFs

297 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_11164 Aegilops tauschii F775_11164 N
BRADI2G54670 Brachypodium distachyon BRADI2G54670 N
MLOC_69561 Hordeum vulgare MLOC_69561 N
LPERR01G31690 Leersia perrieri LPERR01G31690 N
OBART01G36810 Oryza barthii OBART01G36810 N
OB01G45620 Oryza brachyantha OB01G45620 N
ORGLA01G0306900 Oryza glaberrima ORGLA01G0306900 N
OGLUM01G40820 Oryza glumaepatula OGLUM01G40820 N
BGIOSGA004778 Oryza indica BGIOSGA004778 N
OLONG_023424 Oryza longistaminata OLONG_023424 N
OMERI01G33930 Oryza meridionalis OMERI01G33930 N
ONIVA10G04710 Oryza nivara ONIVA10G04710 N
OPUNC01G35740 Oryza punctata OPUNC01G35740 N
ORUFI01G40180 Oryza rufipogon ORUFI01G40180 N
OS01G0842200 Oryza sativa OS01G0842200 N
Pavir.Eb03680 Panicum virgatum Pavir.Eb03680 N
Pavir.Ea03354 Panicum virgatum Pavir.Ea03354 N
PDK_20s1329542g002 Phoenix dactylifera PDK_20s1329542g002 N
Si000234m.g Setaria italica Si000234m.g N
Sb03g039510 Sorghum bicolor Sb03g039510 N
Traes_3AL_60B6CD0A5 Triticum aestivum Traes_3AL_60B6CD0A5 N
Traes_3B_A25F058E5 Triticum aestivum Traes_3B_A25F058E5 N
TRAES3BF090100150CFD_g Triticum aestivum TRAES3BF090100150CFD_g N
TRAES3BF108400020CFD_g Triticum aestivum TRAES3BF108400020CFD_g N
Traes_4DS_050789E2A Triticum aestivum Traes_4DS_050789E2A N
TRIUR3_23165 Triticum urartu TRIUR3_23165 N
GRMZM2G157679 Zea mays GRMZM2G157679 N