CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SapurV1A.0841s0060
(
Salix purpurea
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
SapurV1A.0841s0060
T289804_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SapurV1A.0841s0060.1.p
Myb
823
882
RNKWKPEEVKSLIKMRGELHSRFQVVRGRMALWEEISTNFMADGINRSPGQCKSLWTSLV
SapurV1A.0841s0060.2.p
Myb
694
753
RNKWKPEEVKSLIKMRGELHSRFQVVRGRMALWEEISTNFMADGINRSPGQCKSLWTSLV
SapurV1A.0841s0060.3.p
Myb
646
705
RNKWKPEEVKSLIKMRGELHSRFQVVRGRMALWEEISTNFMADGINRSPGQCKSLWTSLV
Links
Other
Myb/SANT
family TFs
Other
Salix purpurea
TFs
27 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AMTR_s00009p00241540
Amborella trichopoda
AMTR_s00009p00241540
N
0.684
emb2746
Arabidopsis thaliana
AT5G63420
N
0.731
Bostr.0568s0468
Boechera stricta
Bostr.0568s0468
N
0.752
Bo3g103450
Brassica oleracea
Bo3g103450
N
0.752
Bra038629
Brassica rapa
Bra038629
N
0.752
Cagra.0248s0020
Capsella grandiflora
Cagra.0248s0020
N
0.751
Carubv10027519m.g
Capsella rubella
Carubv10027519m.g
N
0.751
evm.TU.supercontig_13.140
Carica papaya
evm.TU.supercontig_13.140
N
0.691
orange1.1g016319m.g
Citrus sinensis
orange1.1g016319m.g
N
0.675
Thhalv10003624m.g
Eutrema salsugineum
Thhalv10003624m.g
N
0.752
gene06358-v1.0-hybrid
Fragaria vesca
gene06358-v1.0-hybrid
N
0.712
gene06360-v1.0-hybrid
Fragaria vesca
gene06360-v1.0-hybrid
N
0.712
Gorai.001G059600
Gossypium raimondii
Gorai.001G059600
N
0.672
LPERR02G15710
Leersia perrieri
LPERR02G15710
N
0.662
Lus10016758.g
Linum usitatissimum
Lus10016758.g
N
0.728
MDP0000313526
Malus domestica
MDP0000313526
N
0.668
MDP0000574910
Malus domestica
MDP0000574910
N
0.668
Pavir.Ab01874
Panicum virgatum
Pavir.Ab01874
N
0.693
POPTR_0012s09780
Populus trichocarpa
POPTR_0012s09780
N
0.899
Pm024489
Prunus mume
Pm024489
N
0.702
PRUPE_ppa001238mg
Prunus persica
PRUPE_ppa001238mg
N
0.702
SapurV1A.0168s0020
Salix purpurea
SapurV1A.0168s0020
N
0.815
Si016284m.g
Setaria italica
Si016284m.g
N
0.693
emb2746
Vitis vinifera
VIT_17s0000g01640
N
0.772
GRMZM2G326783
Zea mays
GRMZM2G326783
N
0.665
GRMZM2G134439
Zea mays
GRMZM2G134439
N
0.662