Thhalv10020579m.g (Eutrema salsugineum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Thhalv10020579m.g T290108_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB3R5
M07116_2.00 		Arabidopsis thaliana
NWWWWNTDRCCGTTR
YAACGGYHANWWWWN		 Dap-seq
OMalley et al.(2016)
MYB3R5_col_a 		0.784 0.886
PC-MYB1
M07110_2.00 		Arabidopsis thaliana
NDWWNTDRCCGTTRN
NYAACGGYHANWWHN		 Dap-seq
OMalley et al.(2016)
MYB3R1_col_a 		0.710 0.764
PC-MYB1
M07111_2.00 		Arabidopsis thaliana
DWHNTDRCCGTTR
YAACGGYHANDWH		 Dap-seq
OMalley et al.(2016)
MYB3R1_colamp_a 		0.710 0.764
PK12011.1
M01279_2.00 		Cannabis sativa
HAACGGHHNN
NNDDCCGTTD		 PBM
Lambert et al.(2019)
pTH11423 		0.693 0.786
Q948S5_TOBAC
M11074_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MYBA2_01 		0.682 0.779
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10020579m Myb 75 121
Thhalv10020579m Myb 127 173
Thhalv10020579m Myb 179 224

Links

Other Myb/SANT family TFs
Other Eutrema salsugineum TFs

142 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_08653 Aegilops tauschii F775_08653 N 0.000
F775_26780 Aegilops tauschii F775_26780 N 0.000
BRADI3G24210 Brachypodium distachyon BRADI3G24210 N 0.000
MLOC_21553 Hordeum vulgare MLOC_21553 N 0.000
MLOC_36533 Hordeum vulgare MLOC_36533 N 0.000
LPERR03G06070 Leersia perrieri LPERR03G06070 N 0.000
LPERR10G05390 Leersia perrieri LPERR10G05390 N 0.000
OBART03G06740 Oryza barthii OBART03G06740 N 0.000
OBART10G07700 Oryza barthii OBART10G07700 N 0.000
OB03G16920 Oryza brachyantha OB03G16920 N 0.000
OB10G15940 Oryza brachyantha OB10G15940 N 0.000
ORGLA10G0063900 Oryza glaberrima ORGLA10G0063900 N 0.000
ORGLA03G0065600 Oryza glaberrima ORGLA03G0065600 N 0.000
OGLUM10G07400 Oryza glumaepatula OGLUM10G07400 N 0.000
OGLUM03G06860 Oryza glumaepatula OGLUM03G06860 N 0.000
BGIOSGA032058 Oryza indica BGIOSGA032058 N 0.000
BGIOSGA012030 Oryza indica BGIOSGA012030 N 0.000
OLONG_015869 Oryza longistaminata OLONG_015869 N 0.000
OMERI03G06660 Oryza meridionalis OMERI03G06660 N 0.000
OMERI10G05450 Oryza meridionalis OMERI10G05450 N 0.000
ONIVA03G06470 Oryza nivara ONIVA03G06470 N 0.000
ONIVA10G07150 Oryza nivara ONIVA10G07150 N 0.000
OPUNC10G06730 Oryza punctata OPUNC10G06730 N 0.000
ORUFI03G06680 Oryza rufipogon ORUFI03G06680 N 0.000
ORUFI10G08100 Oryza rufipogon ORUFI10G08100 N 0.000
OS03G0193000 Oryza sativa OS03G0193000 N 0.000
Pavir.Ib02999 Panicum virgatum Pavir.Ib02999 N 0.000
Pavir.Ib00589 Panicum virgatum Pavir.Ib00589 N 0.000
Pavir.Ia04887 Panicum virgatum Pavir.Ia04887 N 0.000
Pavir.Ia02739 Panicum virgatum Pavir.Ia02739 N 0.000
Si035052m.g Setaria italica Si035052m.g N 0.000
Si035089m.g Setaria italica Si035089m.g N 0.000
Sb01g044280 Sorghum bicolor Sb01g044280 N 0.000
Traes_5AL_83E515188 Triticum aestivum Traes_5AL_83E515188 N 0.000
Traes_5DL_A39210547 Triticum aestivum Traes_5DL_A39210547 N 0.000
Traes_5DL_88247E2B8 Triticum aestivum Traes_5DL_88247E2B8 N 0.000
Traes_5BL_700283665 Triticum aestivum Traes_5BL_700283665 N 0.000
Traes_5BL_04BDEB5D8 Triticum aestivum Traes_5BL_04BDEB5D8 N 0.000
Traes_5AL_4C72C5BCB Triticum aestivum Traes_5AL_4C72C5BCB N 0.000
Traes_4BL_E20E75836 Triticum aestivum Traes_4BL_E20E75836 N 0.000
Traes_4AS_C30034054 Triticum aestivum Traes_4AS_C30034054 N 0.000
TRIUR3_16715 Triticum urartu TRIUR3_16715 N 0.000
TRIUR3_25879 Triticum urartu TRIUR3_25879 N 0.000
TRIUR3_30897 Triticum urartu TRIUR3_30897 N 0.000
GRMZM5G885274 Zea mays GRMZM5G885274 N 0.000
GRMZM2G028039 Zea mays GRMZM2G028039 N 0.000
GRMZM2G116638 Zea mays GRMZM2G116638 N 0.000