PDK_20s1371143g001 (Phoenix dactylifera)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 PDK_20s1371143g001 T291119_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PC-MYB1
M07110_2.00 		Arabidopsis thaliana
NDWWNTDRCCGTTRN
NYAACGGYHANWWHN		 Dap-seq
OMalley et al.(2016)
MYB3R1_col_a 		0.710 0.745
PC-MYB1
M07111_2.00 		Arabidopsis thaliana
DWHNTDRCCGTTR
YAACGGYHANDWH		 Dap-seq
OMalley et al.(2016)
MYB3R1_colamp_a 		0.710 0.745
Q948S5_TOBAC
M11074_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MYBA2_01 		0.700 0.759
Q948S4_TOBAC
M11073_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MYBB_01 		0.672 0.752
PK12011.1
M01279_2.00 		Cannabis sativa
HAACGGHHNN
NNDDCCGTTD		 PBM
Lambert et al.(2019)
pTH11423 		0.669 0.759
MYB3R4
M07125_2.00 		Arabidopsis thaliana
NDWWNTDRCCGTTRN
NYAACGGYHANWWHN		 Dap-seq
OMalley et al.(2016)
MYB3R4_col_a 		0.662 0.730
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PDK_20s1371143g001 Myb 51 97
PDK_20s1371143g001 Myb 103 149
PDK_20s1371143g001 Myb 155 197

Links

Other Myb/SANT family TFs
Other Phoenix dactylifera TFs

89 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_31340 Aegilops tauschii F775_31340 N 0.000
BRADI3G14590 Brachypodium distachyon BRADI3G14590 N 0.000
Gorai.007G314800 Gossypium raimondii Gorai.007G314800 N 0.000
MLOC_6315 Hordeum vulgare MLOC_6315 N 0.000
LPERR08G02470 Leersia perrieri LPERR08G02470 N 0.000
GSMUA_Achr11G14790_001 Musa acuminata GSMUA_Achr11G14790_001 I 0.000
OB08G12550 Oryza brachyantha OB08G12550 N 0.000
ORGLA08G0018000 Oryza glaberrima ORGLA08G0018000 N 0.000
OGLUM08G02420 Oryza glumaepatula OGLUM08G02420 N 0.000
BGIOSGA027691 Oryza indica BGIOSGA027691 N 0.000
OLONG_003616 Oryza longistaminata OLONG_003616 N 0.000
ONIVA08G02550 Oryza nivara ONIVA08G02550 N 0.000
OPUNC08G02220 Oryza punctata OPUNC08G02220 N 0.000
ORUFI08G02650 Oryza rufipogon ORUFI08G02650 N 0.000
OS08G0138500 Oryza sativa OS08G0138500 N 0.000
Pavir.J34678 Panicum virgatum Pavir.J34678 N 0.000
Pavir.J05070 Panicum virgatum Pavir.J05070 N 0.000
Pavir.Fb00223 Panicum virgatum Pavir.Fb00223 N 0.000
Pavir.Fa02284 Panicum virgatum Pavir.Fa02284 N 0.000
Si014339m.g Setaria italica Si014339m.g N 0.000
Sb07g002900 Sorghum bicolor Sb07g002900 N 0.000
Traes_7BL_6324A95B5 Triticum aestivum Traes_7BL_6324A95B5 N 0.000
Traes_7DL_88B60203A Triticum aestivum Traes_7DL_88B60203A N 0.000
Traes_7AL_B9345EB83 Triticum aestivum Traes_7AL_B9345EB83 N 0.000
TRIUR3_32784 Triticum urartu TRIUR3_32784 N 0.000
GRMZM2G017586 Zea mays GRMZM2G017586 N 0.000
GRMZM2G093744 Zea mays GRMZM2G093744 N 0.000