Bo5g148420 (Brassica oleracea)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 Bo5g148420 T292419_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NAC047
M07198_2.00 		Arabidopsis thaliana
CACGB
VCGTG		 Dap-seq
OMalley et al.(2016)
ANAC047_colamp_a 		0.945 0.939
NAC047
M07199_2.00 		Arabidopsis thaliana
WNNNWYACGYMWYYN
NRRWKRCGTRWNNNW		 Dap-seq
OMalley et al.(2016)
ANAC047_col 		0.945 0.939
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo5g148420.1 NAC/NAM 11 139

Links

Other NAC/NAM family TFs
Other Brassica oleracea TFs

29 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_013_00366 Aquilegia coerulea Aquca_013_00366 I 0.000
evm.TU.supercontig_18.208 Carica papaya evm.TU.supercontig_18.208 N 0.000
evm.TU.supercontig_78.76 Carica papaya evm.TU.supercontig_78.76 I 0.000
gene08793-v1.0-hybrid Fragaria vesca gene08793-v1.0-hybrid I 0.000
gene19115-v1.0-hybrid Fragaria vesca gene19115-v1.0-hybrid I 0.000
Gorai.009G051000 Gossypium raimondii Gorai.009G051000 I 0.000
Gorai.010G110000 Gossypium raimondii Gorai.010G110000 I 0.000
Q948S5_TOBAC Nicotiana tabacum Q948S5_TOBAC D 0.000
ATMYB3R2 Populus trichocarpa POPTR_0014s07520 N 0.000
Pm018007 Prunus mume Pm018007 I 0.000
PRUPE_ppa022218mg Prunus persica PRUPE_ppa022218mg I 0.000
SapurV1A.0533s0050 Salix purpurea SapurV1A.0533s0050 N 0.000
SapurV1A.0586s0030 Salix purpurea SapurV1A.0586s0030 N 0.000
TCM_005402 Theobroma cacao TCM_005402 I 0.000
TCM_047091 Theobroma cacao TCM_047091 I 0.000